Gene : Potri.013G021600 P. trichocarpa v3.1
Defline:  (1 of 1) KOG2850 - Predicted peptidoglycan-binding protein, contains LysM domain Genomic Order:  214
Name:  ? Potri.013G021600 Secondary Identifier:  ? PAC:37234763
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G021600 0.5kb upstream 0.5kb upstream 3917 true Chr13: 1435900-1439816 Populus trichocarpa
Potri.013G021600 0.5kb upstream 0.5kb upstream 500 false Chr13: 1435900-1436399 Populus trichocarpa
Potri.013G021600 0.5kb downstream 0.5kb downstream 3917 true Chr13: 1436400-1440316 Populus trichocarpa
Potri.013G021600 0.5kb downstream 0.5kb downstream 500 false Chr13: 1439817-1440316 Populus trichocarpa
Potri.013G021600 1.0kb upstream 1.0kb upstream 4417 true Chr13: 1435400-1439816 Populus trichocarpa
Potri.013G021600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1435400-1436399 Populus trichocarpa
Potri.013G021600 1.0kb downstream 1.0kb downstream 4417 true Chr13: 1436400-1440816 Populus trichocarpa
Potri.013G021600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1439817-1440816 Populus trichocarpa
Potri.013G021600 2.0kb upstream 2.0kb upstream 5417 true Chr13: 1434400-1439816 Populus trichocarpa
Potri.013G021600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1434400-1436399 Populus trichocarpa
Potri.013G021600 2.0kb downstream 2.0kb downstream 5417 true Chr13: 1436400-1441816 Populus trichocarpa
Potri.013G021600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1439817-1441816 Populus trichocarpa
Potri.013G021600 5.0kb upstream 5.0kb upstream 8417 true Chr13: 1431400-1439816 Populus trichocarpa
Potri.013G021600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1431400-1436399 Populus trichocarpa
Potri.013G021600 5.0kb downstream 5.0kb downstream 8417 true Chr13: 1436400-1444816 Populus trichocarpa
Potri.013G021600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1439817-1444816 Populus trichocarpa
Potri.013G021600 10.0kb upstream 10.0kb upstream 13417 true Chr13: 1426400-1439816 Populus trichocarpa
Potri.013G021600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1426400-1436399 Populus trichocarpa
Potri.013G021600 10.0kb downstream 10.0kb downstream 13417 true Chr13: 1436400-1449816 Populus trichocarpa
Potri.013G021600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1439817-1449816 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458356 5262 Malpighiales View MSA
124245072 5268 Malvidae View MSA
124067159 5270 Rosid View MSA
123748908 5271 Pentapetalae View MSA
122796552 5272 Eudicot View MSA
122043653 5273 Angiosperm View MSA
121310161 5274 Embryophyte View MSA
123425497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain