Gene : Potri.012G144200 P. trichocarpa v3.1
Defline:  hydroxyproline-rich glycoprotein family protein; Common family member; [ ortholog of At5g52430,At4g25620,] Genomic Order:  1498
Name:  ? Potri.012G144200 Secondary Identifier:  ? PAC:37281459
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G144200 0.5kb upstream 0.5kb upstream 3716 true Chr12: 15659856-15663571 Populus trichocarpa
Potri.012G144200 0.5kb upstream 0.5kb upstream 500 false Chr12: 15663072-15663571 Populus trichocarpa
Potri.012G144200 0.5kb downstream 0.5kb downstream 3716 true Chr12: 15659356-15663071 Populus trichocarpa
Potri.012G144200 0.5kb downstream 0.5kb downstream 500 false Chr12: 15659356-15659855 Populus trichocarpa
Potri.012G144200 1.0kb upstream 1.0kb upstream 4216 true Chr12: 15659856-15664071 Populus trichocarpa
Potri.012G144200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 15663072-15664071 Populus trichocarpa
Potri.012G144200 1.0kb downstream 1.0kb downstream 4216 true Chr12: 15658856-15663071 Populus trichocarpa
Potri.012G144200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 15658856-15659855 Populus trichocarpa
Potri.012G144200 2.0kb upstream 2.0kb upstream 5216 true Chr12: 15659856-15665071 Populus trichocarpa
Potri.012G144200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 15663072-15665071 Populus trichocarpa
Potri.012G144200 2.0kb downstream 2.0kb downstream 5216 true Chr12: 15657856-15663071 Populus trichocarpa
Potri.012G144200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 15657856-15659855 Populus trichocarpa
Potri.012G144200 5.0kb upstream 5.0kb upstream 8216 true Chr12: 15659856-15668071 Populus trichocarpa
Potri.012G144200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 15663072-15668071 Populus trichocarpa
Potri.012G144200 5.0kb downstream 5.0kb downstream 8216 true Chr12: 15654856-15663071 Populus trichocarpa
Potri.012G144200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 15654856-15659855 Populus trichocarpa
Potri.012G144200 10.0kb upstream 10.0kb upstream 13216 true Chr12: 15659856-15673071 Populus trichocarpa
Potri.012G144200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 15663072-15673071 Populus trichocarpa
Potri.012G144200 10.0kb downstream 10.0kb downstream 13216 true Chr12: 15649856-15663071 Populus trichocarpa
Potri.012G144200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 15649856-15659855 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453606 5262 Malpighiales View MSA
124244713 5268 Malvidae View MSA
124071486 5270 Rosid View MSA
123741835 5271 Pentapetalae View MSA
122789681 5272 Eudicot View MSA
122042533 5273 Angiosperm View MSA
121350164 5274 Embryophyte View MSA
123381599 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain