Gene : Potri.013G005000 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Genomic Order:  52
Name:  ? Potri.013G005000 Secondary Identifier:  ? PAC:37234195
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G005000 0.5kb upstream 0.5kb upstream 3202 true Chr13: 329165-332366 Populus trichocarpa
Potri.013G005000 0.5kb upstream 0.5kb upstream 500 false Chr13: 329165-329664 Populus trichocarpa
Potri.013G005000 0.5kb downstream 0.5kb downstream 3202 true Chr13: 329665-332866 Populus trichocarpa
Potri.013G005000 0.5kb downstream 0.5kb downstream 500 false Chr13: 332367-332866 Populus trichocarpa
Potri.013G005000 1.0kb upstream 1.0kb upstream 3702 true Chr13: 328665-332366 Populus trichocarpa
Potri.013G005000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 328665-329664 Populus trichocarpa
Potri.013G005000 1.0kb downstream 1.0kb downstream 3702 true Chr13: 329665-333366 Populus trichocarpa
Potri.013G005000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 332367-333366 Populus trichocarpa
Potri.013G005000 2.0kb upstream 2.0kb upstream 4702 true Chr13: 327665-332366 Populus trichocarpa
Potri.013G005000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 327665-329664 Populus trichocarpa
Potri.013G005000 2.0kb downstream 2.0kb downstream 4702 true Chr13: 329665-334366 Populus trichocarpa
Potri.013G005000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 332367-334366 Populus trichocarpa
Potri.013G005000 5.0kb upstream 5.0kb upstream 7702 true Chr13: 324665-332366 Populus trichocarpa
Potri.013G005000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 324665-329664 Populus trichocarpa
Potri.013G005000 5.0kb downstream 5.0kb downstream 7702 true Chr13: 329665-337366 Populus trichocarpa
Potri.013G005000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 332367-337366 Populus trichocarpa
Potri.013G005000 10.0kb upstream 10.0kb upstream 12702 true Chr13: 319665-332366 Populus trichocarpa
Potri.013G005000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 319665-329664 Populus trichocarpa
Potri.013G005000 10.0kb downstream 10.0kb downstream 12702 true Chr13: 329665-342366 Populus trichocarpa
Potri.013G005000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 332367-342366 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426555 5262 Malpighiales View MSA
124250647 5268 Malvidae View MSA
124071309 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain