Gene : Potri.012G128800 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  1343
Name:  ? Potri.012G128800 Secondary Identifier:  ? PAC:37280626

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY66-422 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G128800 0.5kb upstream 0.5kb upstream 3362 true Chr12: 14610820-14614181 Populus trichocarpa
Potri.012G128800 0.5kb upstream 0.5kb upstream 500 false Chr12: 14610820-14611319 Populus trichocarpa
Potri.012G128800 0.5kb downstream 0.5kb downstream 3362 true Chr12: 14611320-14614681 Populus trichocarpa
Potri.012G128800 0.5kb downstream 0.5kb downstream 500 false Chr12: 14614182-14614681 Populus trichocarpa
Potri.012G128800 1.0kb upstream 1.0kb upstream 3862 true Chr12: 14610320-14614181 Populus trichocarpa
Potri.012G128800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 14610320-14611319 Populus trichocarpa
Potri.012G128800 1.0kb downstream 1.0kb downstream 3862 true Chr12: 14611320-14615181 Populus trichocarpa
Potri.012G128800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 14614182-14615181 Populus trichocarpa
Potri.012G128800 2.0kb upstream 2.0kb upstream 4862 true Chr12: 14609320-14614181 Populus trichocarpa
Potri.012G128800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 14609320-14611319 Populus trichocarpa
Potri.012G128800 2.0kb downstream 2.0kb downstream 4862 true Chr12: 14611320-14616181 Populus trichocarpa
Potri.012G128800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 14614182-14616181 Populus trichocarpa
Potri.012G128800 5.0kb upstream 5.0kb upstream 7862 true Chr12: 14606320-14614181 Populus trichocarpa
Potri.012G128800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 14606320-14611319 Populus trichocarpa
Potri.012G128800 5.0kb downstream 5.0kb downstream 7862 true Chr12: 14611320-14619181 Populus trichocarpa
Potri.012G128800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 14614182-14619181 Populus trichocarpa
Potri.012G128800 10.0kb upstream 10.0kb upstream 12862 true Chr12: 14601320-14614181 Populus trichocarpa
Potri.012G128800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 14601320-14611319 Populus trichocarpa
Potri.012G128800 10.0kb downstream 10.0kb downstream 12862 true Chr12: 14611320-14624181 Populus trichocarpa
Potri.012G128800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 14614182-14624181 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453345 5262 Malpighiales View MSA
124241568 5268 Malvidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain