Gene : Potri.012G111200 P. trichocarpa v3.1
Defline:  (1 of 2) K15979 - staphylococcal nuclease domain-containing protein 1 (SND1) Genomic Order:  1155
Name:  ? Potri.012G111200 Secondary Identifier:  ? PAC:37281831
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G111200 0.5kb upstream 0.5kb upstream 7606 true Chr12: 13303989-13311594 Populus trichocarpa
Potri.012G111200 0.5kb upstream 0.5kb upstream 500 false Chr12: 13311095-13311594 Populus trichocarpa
Potri.012G111200 0.5kb downstream 0.5kb downstream 7606 true Chr12: 13303489-13311094 Populus trichocarpa
Potri.012G111200 0.5kb downstream 0.5kb downstream 500 false Chr12: 13303489-13303988 Populus trichocarpa
Potri.012G111200 1.0kb upstream 1.0kb upstream 8106 true Chr12: 13303989-13312094 Populus trichocarpa
Potri.012G111200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 13311095-13312094 Populus trichocarpa
Potri.012G111200 1.0kb downstream 1.0kb downstream 8106 true Chr12: 13302989-13311094 Populus trichocarpa
Potri.012G111200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 13302989-13303988 Populus trichocarpa
Potri.012G111200 2.0kb upstream 2.0kb upstream 9106 true Chr12: 13303989-13313094 Populus trichocarpa
Potri.012G111200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 13311095-13313094 Populus trichocarpa
Potri.012G111200 2.0kb downstream 2.0kb downstream 9106 true Chr12: 13301989-13311094 Populus trichocarpa
Potri.012G111200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 13301989-13303988 Populus trichocarpa
Potri.012G111200 5.0kb upstream 5.0kb upstream 12106 true Chr12: 13303989-13316094 Populus trichocarpa
Potri.012G111200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 13311095-13316094 Populus trichocarpa
Potri.012G111200 5.0kb downstream 5.0kb downstream 12106 true Chr12: 13298989-13311094 Populus trichocarpa
Potri.012G111200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 13298989-13303988 Populus trichocarpa
Potri.012G111200 10.0kb upstream 10.0kb upstream 17106 true Chr12: 13303989-13321094 Populus trichocarpa
Potri.012G111200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 13311095-13321094 Populus trichocarpa
Potri.012G111200 10.0kb downstream 10.0kb downstream 17106 true Chr12: 13293989-13311094 Populus trichocarpa
Potri.012G111200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 13293989-13303988 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122410367 5262 Malpighiales View MSA
124253737 5268 Malvidae View MSA
124063512 5270 Rosid View MSA
123750143 5271 Pentapetalae View MSA
122792240 5272 Eudicot View MSA
122045842 5273 Angiosperm View MSA
121344100 5274 Embryophyte View MSA
123426864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain