Gene : Potri.013G043500 P. trichocarpa v3.1
Defline:  (1 of 2) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  441
Name:  ? Potri.013G043500 Secondary Identifier:  ? PAC:37233362
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6124 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G043500 0.5kb upstream 0.5kb upstream 6997 true Chr13: 3067540-3074536 Populus trichocarpa
Potri.013G043500 0.5kb upstream 0.5kb upstream 500 false Chr13: 3067540-3068039 Populus trichocarpa
Potri.013G043500 0.5kb downstream 0.5kb downstream 6997 true Chr13: 3068040-3075036 Populus trichocarpa
Potri.013G043500 0.5kb downstream 0.5kb downstream 500 false Chr13: 3074537-3075036 Populus trichocarpa
Potri.013G043500 1.0kb upstream 1.0kb upstream 7497 true Chr13: 3067040-3074536 Populus trichocarpa
Potri.013G043500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 3067040-3068039 Populus trichocarpa
Potri.013G043500 1.0kb downstream 1.0kb downstream 7497 true Chr13: 3068040-3075536 Populus trichocarpa
Potri.013G043500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 3074537-3075536 Populus trichocarpa
Potri.013G043500 2.0kb upstream 2.0kb upstream 8497 true Chr13: 3066040-3074536 Populus trichocarpa
Potri.013G043500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 3066040-3068039 Populus trichocarpa
Potri.013G043500 2.0kb downstream 2.0kb downstream 8497 true Chr13: 3068040-3076536 Populus trichocarpa
Potri.013G043500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 3074537-3076536 Populus trichocarpa
Potri.013G043500 5.0kb upstream 5.0kb upstream 11497 true Chr13: 3063040-3074536 Populus trichocarpa
Potri.013G043500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 3063040-3068039 Populus trichocarpa
Potri.013G043500 5.0kb downstream 5.0kb downstream 11497 true Chr13: 3068040-3079536 Populus trichocarpa
Potri.013G043500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 3074537-3079536 Populus trichocarpa
Potri.013G043500 10.0kb upstream 10.0kb upstream 16497 true Chr13: 3058040-3074536 Populus trichocarpa
Potri.013G043500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 3058040-3068039 Populus trichocarpa
Potri.013G043500 10.0kb downstream 10.0kb downstream 16497 true Chr13: 3068040-3084536 Populus trichocarpa
Potri.013G043500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 3074537-3084536 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122413365 5262 Malpighiales View MSA
124207056 5268 Malvidae View MSA
123925821 5270 Rosid View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain