Gene : Potri.013G027600 P. trichocarpa v3.1

Defline:  (1 of 4) K02873 - large subunit ribosomal protein L13e (RP-L13e, RPL13) Genomic Order:  276
Name:  ? Potri.013G027600 Secondary Identifier:  ? PAC:37233059

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G027600 0.5kb upstream 0.5kb upstream 2636 true Chr13: 1827948-1830583 Populus trichocarpa
Potri.013G027600 0.5kb upstream 0.5kb upstream 500 false Chr13: 1827948-1828447 Populus trichocarpa
Potri.013G027600 0.5kb downstream 0.5kb downstream 2636 true Chr13: 1828448-1831083 Populus trichocarpa
Potri.013G027600 0.5kb downstream 0.5kb downstream 500 false Chr13: 1830584-1831083 Populus trichocarpa
Potri.013G027600 1.0kb upstream 1.0kb upstream 3136 true Chr13: 1827448-1830583 Populus trichocarpa
Potri.013G027600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1827448-1828447 Populus trichocarpa
Potri.013G027600 1.0kb downstream 1.0kb downstream 3136 true Chr13: 1828448-1831583 Populus trichocarpa
Potri.013G027600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1830584-1831583 Populus trichocarpa
Potri.013G027600 2.0kb upstream 2.0kb upstream 4136 true Chr13: 1826448-1830583 Populus trichocarpa
Potri.013G027600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1826448-1828447 Populus trichocarpa
Potri.013G027600 2.0kb downstream 2.0kb downstream 4136 true Chr13: 1828448-1832583 Populus trichocarpa
Potri.013G027600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1830584-1832583 Populus trichocarpa
Potri.013G027600 5.0kb upstream 5.0kb upstream 7136 true Chr13: 1823448-1830583 Populus trichocarpa
Potri.013G027600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1823448-1828447 Populus trichocarpa
Potri.013G027600 5.0kb downstream 5.0kb downstream 7136 true Chr13: 1828448-1835583 Populus trichocarpa
Potri.013G027600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1830584-1835583 Populus trichocarpa
Potri.013G027600 10.0kb upstream 10.0kb upstream 12136 true Chr13: 1818448-1830583 Populus trichocarpa
Potri.013G027600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1818448-1828447 Populus trichocarpa
Potri.013G027600 10.0kb downstream 10.0kb downstream 12136 true Chr13: 1828448-1840583 Populus trichocarpa
Potri.013G027600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1830584-1840583 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448200 5262 Malpighiales View MSA
124242702 5268 Malvidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain