Gene : Potri.013G029800 P. trichocarpa v3.1
Defline:  (1 of 6) K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) Genomic Order:  298
Name:  ? Potri.013G029800 Secondary Identifier:  ? PAC:37232833
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ARO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6163 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G029800 0.5kb upstream 0.5kb upstream 6170 true Chr13: 1963804-1969973 Populus trichocarpa
Potri.013G029800 0.5kb upstream 0.5kb upstream 500 false Chr13: 1969474-1969973 Populus trichocarpa
Potri.013G029800 0.5kb downstream 0.5kb downstream 6170 true Chr13: 1963304-1969473 Populus trichocarpa
Potri.013G029800 0.5kb downstream 0.5kb downstream 500 false Chr13: 1963304-1963803 Populus trichocarpa
Potri.013G029800 1.0kb upstream 1.0kb upstream 6670 true Chr13: 1963804-1970473 Populus trichocarpa
Potri.013G029800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1969474-1970473 Populus trichocarpa
Potri.013G029800 1.0kb downstream 1.0kb downstream 6670 true Chr13: 1962804-1969473 Populus trichocarpa
Potri.013G029800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1962804-1963803 Populus trichocarpa
Potri.013G029800 2.0kb upstream 2.0kb upstream 7670 true Chr13: 1963804-1971473 Populus trichocarpa
Potri.013G029800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1969474-1971473 Populus trichocarpa
Potri.013G029800 2.0kb downstream 2.0kb downstream 7670 true Chr13: 1961804-1969473 Populus trichocarpa
Potri.013G029800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1961804-1963803 Populus trichocarpa
Potri.013G029800 5.0kb upstream 5.0kb upstream 10670 true Chr13: 1963804-1974473 Populus trichocarpa
Potri.013G029800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1969474-1974473 Populus trichocarpa
Potri.013G029800 5.0kb downstream 5.0kb downstream 10670 true Chr13: 1958804-1969473 Populus trichocarpa
Potri.013G029800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1958804-1963803 Populus trichocarpa
Potri.013G029800 10.0kb upstream 10.0kb upstream 15670 true Chr13: 1963804-1979473 Populus trichocarpa
Potri.013G029800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1969474-1979473 Populus trichocarpa
Potri.013G029800 10.0kb downstream 10.0kb downstream 15670 true Chr13: 1953804-1969473 Populus trichocarpa
Potri.013G029800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1953804-1963803 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461136 5262 Malpighiales View MSA
124248451 5268 Malvidae View MSA
124071132 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain