Gene : Potri.013G031100 P. trichocarpa v3.1
Defline:  (1 of 6) K04565 - superoxide dismutase, Cu-Zn family (SOD1) Genomic Order:  313
Name:  ? Potri.013G031100 Secondary Identifier:  ? PAC:37233755
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa DETOX1-PWY Populus trichocarpa pathologic  
Ptrichocarpa DETOX1-PWY-1 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6854 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G031100 0.5kb upstream 0.5kb upstream 4077 true Chr13: 2060080-2064156 Populus trichocarpa
Potri.013G031100 0.5kb upstream 0.5kb upstream 500 false Chr13: 2063657-2064156 Populus trichocarpa
Potri.013G031100 0.5kb downstream 0.5kb downstream 4077 true Chr13: 2059580-2063656 Populus trichocarpa
Potri.013G031100 0.5kb downstream 0.5kb downstream 500 false Chr13: 2059580-2060079 Populus trichocarpa
Potri.013G031100 1.0kb upstream 1.0kb upstream 4577 true Chr13: 2060080-2064656 Populus trichocarpa
Potri.013G031100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 2063657-2064656 Populus trichocarpa
Potri.013G031100 1.0kb downstream 1.0kb downstream 4577 true Chr13: 2059080-2063656 Populus trichocarpa
Potri.013G031100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 2059080-2060079 Populus trichocarpa
Potri.013G031100 2.0kb upstream 2.0kb upstream 5577 true Chr13: 2060080-2065656 Populus trichocarpa
Potri.013G031100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 2063657-2065656 Populus trichocarpa
Potri.013G031100 2.0kb downstream 2.0kb downstream 5577 true Chr13: 2058080-2063656 Populus trichocarpa
Potri.013G031100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 2058080-2060079 Populus trichocarpa
Potri.013G031100 5.0kb upstream 5.0kb upstream 8577 true Chr13: 2060080-2068656 Populus trichocarpa
Potri.013G031100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 2063657-2068656 Populus trichocarpa
Potri.013G031100 5.0kb downstream 5.0kb downstream 8577 true Chr13: 2055080-2063656 Populus trichocarpa
Potri.013G031100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 2055080-2060079 Populus trichocarpa
Potri.013G031100 10.0kb upstream 10.0kb upstream 13577 true Chr13: 2060080-2073656 Populus trichocarpa
Potri.013G031100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 2063657-2073656 Populus trichocarpa
Potri.013G031100 10.0kb downstream 10.0kb downstream 13577 true Chr13: 2050080-2063656 Populus trichocarpa
Potri.013G031100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 2050080-2060079 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461896 5262 Malpighiales View MSA
124238216 5268 Malvidae View MSA
124071759 5270 Rosid View MSA
123743890 5271 Pentapetalae View MSA
122797763 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain