Gene : Potri.013G137100 P. trichocarpa v3.1
Defline:  (1 of 5) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) Genomic Order:  1401
Name:  ? Potri.013G137100 Secondary Identifier:  ? PAC:37235060
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G137100 0.5kb upstream 0.5kb upstream 2020 true Chr13: 14670826-14672845 Populus trichocarpa
Potri.013G137100 0.5kb upstream 0.5kb upstream 500 false Chr13: 14672346-14672845 Populus trichocarpa
Potri.013G137100 0.5kb downstream 0.5kb downstream 2020 true Chr13: 14670326-14672345 Populus trichocarpa
Potri.013G137100 0.5kb downstream 0.5kb downstream 500 false Chr13: 14670326-14670825 Populus trichocarpa
Potri.013G137100 1.0kb upstream 1.0kb upstream 2520 true Chr13: 14670826-14673345 Populus trichocarpa
Potri.013G137100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14672346-14673345 Populus trichocarpa
Potri.013G137100 1.0kb downstream 1.0kb downstream 2520 true Chr13: 14669826-14672345 Populus trichocarpa
Potri.013G137100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14669826-14670825 Populus trichocarpa
Potri.013G137100 2.0kb upstream 2.0kb upstream 3520 true Chr13: 14670826-14674345 Populus trichocarpa
Potri.013G137100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14672346-14674345 Populus trichocarpa
Potri.013G137100 2.0kb downstream 2.0kb downstream 3520 true Chr13: 14668826-14672345 Populus trichocarpa
Potri.013G137100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14668826-14670825 Populus trichocarpa
Potri.013G137100 5.0kb upstream 5.0kb upstream 6520 true Chr13: 14670826-14677345 Populus trichocarpa
Potri.013G137100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14672346-14677345 Populus trichocarpa
Potri.013G137100 5.0kb downstream 5.0kb downstream 6520 true Chr13: 14665826-14672345 Populus trichocarpa
Potri.013G137100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14665826-14670825 Populus trichocarpa
Potri.013G137100 10.0kb upstream 10.0kb upstream 11520 true Chr13: 14670826-14682345 Populus trichocarpa
Potri.013G137100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14672346-14682345 Populus trichocarpa
Potri.013G137100 10.0kb downstream 10.0kb downstream 11520 true Chr13: 14660826-14672345 Populus trichocarpa
Potri.013G137100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14660826-14670825 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784833 5273 Angiosperm View MSA
122395806 5262 Malpighiales Singleton cluster - no MSA
124193070 5268 Malvidae Singleton cluster - no MSA
123913674 5270 Rosid Singleton cluster - no MSA
123757009 5271 Pentapetalae View MSA
122778095 5272 Eudicot View MSA
121056237 5274 Embryophyte View MSA
123096153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain