Gene : Potri.013G142800 P. trichocarpa v3.1
Defline:  (1 of 3) KOG1353 - F0F1-type ATP synthase, alpha subunit Genomic Order:  1469
Name:  ? Potri.013G142800 Secondary Identifier:  ? PAC:37233189
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6126 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7219 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7229 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G142800 0.5kb upstream 0.5kb upstream 3287 true Chr13: 14884052-14887338 Populus trichocarpa
Potri.013G142800 0.5kb upstream 0.5kb upstream 500 false Chr13: 14884052-14884551 Populus trichocarpa
Potri.013G142800 0.5kb downstream 0.5kb downstream 3287 true Chr13: 14884552-14887838 Populus trichocarpa
Potri.013G142800 0.5kb downstream 0.5kb downstream 500 false Chr13: 14887339-14887838 Populus trichocarpa
Potri.013G142800 1.0kb upstream 1.0kb upstream 3787 true Chr13: 14883552-14887338 Populus trichocarpa
Potri.013G142800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14883552-14884551 Populus trichocarpa
Potri.013G142800 1.0kb downstream 1.0kb downstream 3787 true Chr13: 14884552-14888338 Populus trichocarpa
Potri.013G142800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14887339-14888338 Populus trichocarpa
Potri.013G142800 2.0kb upstream 2.0kb upstream 4787 true Chr13: 14882552-14887338 Populus trichocarpa
Potri.013G142800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14882552-14884551 Populus trichocarpa
Potri.013G142800 2.0kb downstream 2.0kb downstream 4787 true Chr13: 14884552-14889338 Populus trichocarpa
Potri.013G142800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14887339-14889338 Populus trichocarpa
Potri.013G142800 5.0kb upstream 5.0kb upstream 7787 true Chr13: 14879552-14887338 Populus trichocarpa
Potri.013G142800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14879552-14884551 Populus trichocarpa
Potri.013G142800 5.0kb downstream 5.0kb downstream 7787 true Chr13: 14884552-14892338 Populus trichocarpa
Potri.013G142800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14887339-14892338 Populus trichocarpa
Potri.013G142800 10.0kb upstream 10.0kb upstream 12787 true Chr13: 14874552-14887338 Populus trichocarpa
Potri.013G142800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14874552-14884551 Populus trichocarpa
Potri.013G142800 10.0kb downstream 10.0kb downstream 12787 true Chr13: 14884552-14897338 Populus trichocarpa
Potri.013G142800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14887339-14897338 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426540 5262 Malpighiales View MSA
124253426 5268 Malvidae View MSA
124064158 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain