Gene : Potri.013G128200 P. trichocarpa v3.1

Defline:  (1 of 2) KOG3419 - Mitochondrial/chloroplast ribosomal protein S16 Genomic Order:  1308
Name:  ? Potri.013G128200 Secondary Identifier:  ? PAC:37234383

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G128200 0.5kb upstream 0.5kb upstream 2275 true Chr13: 14055487-14057761 Populus trichocarpa
Potri.013G128200 0.5kb upstream 0.5kb upstream 500 false Chr13: 14055487-14055986 Populus trichocarpa
Potri.013G128200 0.5kb downstream 0.5kb downstream 2275 true Chr13: 14055987-14058261 Populus trichocarpa
Potri.013G128200 0.5kb downstream 0.5kb downstream 500 false Chr13: 14057762-14058261 Populus trichocarpa
Potri.013G128200 1.0kb upstream 1.0kb upstream 2775 true Chr13: 14054987-14057761 Populus trichocarpa
Potri.013G128200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14054987-14055986 Populus trichocarpa
Potri.013G128200 1.0kb downstream 1.0kb downstream 2775 true Chr13: 14055987-14058761 Populus trichocarpa
Potri.013G128200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14057762-14058761 Populus trichocarpa
Potri.013G128200 2.0kb upstream 2.0kb upstream 3775 true Chr13: 14053987-14057761 Populus trichocarpa
Potri.013G128200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14053987-14055986 Populus trichocarpa
Potri.013G128200 2.0kb downstream 2.0kb downstream 3775 true Chr13: 14055987-14059761 Populus trichocarpa
Potri.013G128200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14057762-14059761 Populus trichocarpa
Potri.013G128200 5.0kb upstream 5.0kb upstream 6775 true Chr13: 14050987-14057761 Populus trichocarpa
Potri.013G128200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14050987-14055986 Populus trichocarpa
Potri.013G128200 5.0kb downstream 5.0kb downstream 6775 true Chr13: 14055987-14062761 Populus trichocarpa
Potri.013G128200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14057762-14062761 Populus trichocarpa
Potri.013G128200 10.0kb upstream 10.0kb upstream 11775 true Chr13: 14045987-14057761 Populus trichocarpa
Potri.013G128200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14045987-14055986 Populus trichocarpa
Potri.013G128200 10.0kb downstream 10.0kb downstream 11775 true Chr13: 14055987-14067761 Populus trichocarpa
Potri.013G128200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14057762-14067761 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121563030 5273 Angiosperm View MSA
122425843 5262 Malpighiales View MSA
124217126 5268 Malvidae View MSA
123934409 5270 Rosid View MSA
123513401 5271 Pentapetalae View MSA
122548445 5272 Eudicot View MSA
120835604 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain