Gene : Potri.013G117100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  1193
Name:  ? Potri.013G117100 Secondary Identifier:  ? PAC:37233357
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G117100 0.5kb upstream 0.5kb upstream 5229 true Chr13: 13031717-13036945 Populus trichocarpa
Potri.013G117100 0.5kb upstream 0.5kb upstream 500 false Chr13: 13031717-13032216 Populus trichocarpa
Potri.013G117100 0.5kb downstream 0.5kb downstream 5229 true Chr13: 13032217-13037445 Populus trichocarpa
Potri.013G117100 0.5kb downstream 0.5kb downstream 500 false Chr13: 13036946-13037445 Populus trichocarpa
Potri.013G117100 1.0kb upstream 1.0kb upstream 5729 true Chr13: 13031217-13036945 Populus trichocarpa
Potri.013G117100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 13031217-13032216 Populus trichocarpa
Potri.013G117100 1.0kb downstream 1.0kb downstream 5729 true Chr13: 13032217-13037945 Populus trichocarpa
Potri.013G117100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 13036946-13037945 Populus trichocarpa
Potri.013G117100 2.0kb upstream 2.0kb upstream 6729 true Chr13: 13030217-13036945 Populus trichocarpa
Potri.013G117100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 13030217-13032216 Populus trichocarpa
Potri.013G117100 2.0kb downstream 2.0kb downstream 6729 true Chr13: 13032217-13038945 Populus trichocarpa
Potri.013G117100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 13036946-13038945 Populus trichocarpa
Potri.013G117100 5.0kb upstream 5.0kb upstream 9729 true Chr13: 13027217-13036945 Populus trichocarpa
Potri.013G117100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 13027217-13032216 Populus trichocarpa
Potri.013G117100 5.0kb downstream 5.0kb downstream 9729 true Chr13: 13032217-13041945 Populus trichocarpa
Potri.013G117100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 13036946-13041945 Populus trichocarpa
Potri.013G117100 10.0kb upstream 10.0kb upstream 14729 true Chr13: 13022217-13036945 Populus trichocarpa
Potri.013G117100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 13022217-13032216 Populus trichocarpa
Potri.013G117100 10.0kb downstream 10.0kb downstream 14729 true Chr13: 13032217-13046945 Populus trichocarpa
Potri.013G117100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 13036946-13046945 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450671 5262 Malpighiales View MSA
124245103 5268 Malvidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain