Gene : Potri.013G120500 P. trichocarpa v3.1

Defline:  (1 of 3) K03016 - DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RPB8, POLR2H) Genomic Order:  1229
Name:  ? Potri.013G120500 Secondary Identifier:  ? PAC:37234452

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G120500 0.5kb upstream 0.5kb upstream 3025 true Chr13: 13388006-13391030 Populus trichocarpa
Potri.013G120500 0.5kb upstream 0.5kb upstream 500 false Chr13: 13390531-13391030 Populus trichocarpa
Potri.013G120500 0.5kb downstream 0.5kb downstream 3025 true Chr13: 13387506-13390530 Populus trichocarpa
Potri.013G120500 0.5kb downstream 0.5kb downstream 500 false Chr13: 13387506-13388005 Populus trichocarpa
Potri.013G120500 1.0kb upstream 1.0kb upstream 3525 true Chr13: 13388006-13391530 Populus trichocarpa
Potri.013G120500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 13390531-13391530 Populus trichocarpa
Potri.013G120500 1.0kb downstream 1.0kb downstream 3525 true Chr13: 13387006-13390530 Populus trichocarpa
Potri.013G120500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 13387006-13388005 Populus trichocarpa
Potri.013G120500 2.0kb upstream 2.0kb upstream 4525 true Chr13: 13388006-13392530 Populus trichocarpa
Potri.013G120500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 13390531-13392530 Populus trichocarpa
Potri.013G120500 2.0kb downstream 2.0kb downstream 4525 true Chr13: 13386006-13390530 Populus trichocarpa
Potri.013G120500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 13386006-13388005 Populus trichocarpa
Potri.013G120500 5.0kb upstream 5.0kb upstream 7525 true Chr13: 13388006-13395530 Populus trichocarpa
Potri.013G120500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 13390531-13395530 Populus trichocarpa
Potri.013G120500 5.0kb downstream 5.0kb downstream 7525 true Chr13: 13383006-13390530 Populus trichocarpa
Potri.013G120500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 13383006-13388005 Populus trichocarpa
Potri.013G120500 10.0kb upstream 10.0kb upstream 12525 true Chr13: 13388006-13400530 Populus trichocarpa
Potri.013G120500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 13390531-13400530 Populus trichocarpa
Potri.013G120500 10.0kb downstream 10.0kb downstream 12525 true Chr13: 13378006-13390530 Populus trichocarpa
Potri.013G120500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 13378006-13388005 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456154 5262 Malpighiales View MSA
124242683 5268 Malvidae View MSA
124064544 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain