Gene : Potri.013G099500 P. trichocarpa v3.1

Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Homoserine dehydrogenase // Aspartate kinase / Aspartokinase Genomic Order:  1007
Name:  ? Potri.013G099500 Secondary Identifier:  ? PAC:37234638

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa HOMOSERSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5097 Populus trichocarpa pathologic  
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  
Ptrichocarpa THRESYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G099500 0.5kb upstream 0.5kb upstream 10227 true Chr13: 10925522-10935748 Populus trichocarpa
Potri.013G099500 0.5kb upstream 0.5kb upstream 500 false Chr13: 10925522-10926021 Populus trichocarpa
Potri.013G099500 0.5kb downstream 0.5kb downstream 10227 true Chr13: 10926022-10936248 Populus trichocarpa
Potri.013G099500 0.5kb downstream 0.5kb downstream 500 false Chr13: 10935749-10936248 Populus trichocarpa
Potri.013G099500 1.0kb upstream 1.0kb upstream 10727 true Chr13: 10925022-10935748 Populus trichocarpa
Potri.013G099500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 10925022-10926021 Populus trichocarpa
Potri.013G099500 1.0kb downstream 1.0kb downstream 10727 true Chr13: 10926022-10936748 Populus trichocarpa
Potri.013G099500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 10935749-10936748 Populus trichocarpa
Potri.013G099500 2.0kb upstream 2.0kb upstream 11727 true Chr13: 10924022-10935748 Populus trichocarpa
Potri.013G099500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 10924022-10926021 Populus trichocarpa
Potri.013G099500 2.0kb downstream 2.0kb downstream 11727 true Chr13: 10926022-10937748 Populus trichocarpa
Potri.013G099500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 10935749-10937748 Populus trichocarpa
Potri.013G099500 5.0kb upstream 5.0kb upstream 14727 true Chr13: 10921022-10935748 Populus trichocarpa
Potri.013G099500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 10921022-10926021 Populus trichocarpa
Potri.013G099500 5.0kb downstream 5.0kb downstream 14727 true Chr13: 10926022-10940748 Populus trichocarpa
Potri.013G099500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 10935749-10940748 Populus trichocarpa
Potri.013G099500 10.0kb upstream 10.0kb upstream 19727 true Chr13: 10916022-10935748 Populus trichocarpa
Potri.013G099500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 10916022-10926021 Populus trichocarpa
Potri.013G099500 10.0kb downstream 10.0kb downstream 19727 true Chr13: 10926022-10945748 Populus trichocarpa
Potri.013G099500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 10935749-10945748 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121548392 5273 Angiosperm View MSA
122400798 5262 Malpighiales View MSA
124197350 5268 Malvidae View MSA
123917462 5270 Rosid View MSA
123498110 5271 Pentapetalae View MSA
122533263 5272 Eudicot View MSA
121350238 5274 Embryophyte View MSA
123423775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain