Gene : Potri.014G015866 P. trichocarpa v3.1

Defline:  (1 of 2) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  177
Name:  ? Potri.014G015866 Secondary Identifier:  ? PAC:37266981

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G015866 0.5kb upstream 0.5kb upstream 3555   true Chr14: 1539984-1543538 Populus trichocarpa
Potri.014G015866 0.5kb upstream 0.5kb upstream 500   false Chr14: 1539984-1540483 Populus trichocarpa
Potri.014G015866 0.5kb downstream 0.5kb downstream 3555   true Chr14: 1540484-1544038 Populus trichocarpa
Potri.014G015866 0.5kb downstream 0.5kb downstream 500   false Chr14: 1543539-1544038 Populus trichocarpa
Potri.014G015866 1.0kb upstream 1.0kb upstream 4055   true Chr14: 1539484-1543538 Populus trichocarpa
Potri.014G015866 1.0kb upstream 1.0kb upstream 1000   false Chr14: 1539484-1540483 Populus trichocarpa
Potri.014G015866 1.0kb downstream 1.0kb downstream 4055   true Chr14: 1540484-1544538 Populus trichocarpa
Potri.014G015866 1.0kb downstream 1.0kb downstream 1000   false Chr14: 1543539-1544538 Populus trichocarpa
Potri.014G015866 2.0kb upstream 2.0kb upstream 5055   true Chr14: 1538484-1543538 Populus trichocarpa
Potri.014G015866 2.0kb upstream 2.0kb upstream 2000   false Chr14: 1538484-1540483 Populus trichocarpa
Potri.014G015866 2.0kb downstream 2.0kb downstream 5055   true Chr14: 1540484-1545538 Populus trichocarpa
Potri.014G015866 2.0kb downstream 2.0kb downstream 2000   false Chr14: 1543539-1545538 Populus trichocarpa
Potri.014G015866 5.0kb upstream 5.0kb upstream 8055   true Chr14: 1535484-1543538 Populus trichocarpa
Potri.014G015866 5.0kb upstream 5.0kb upstream 5000   false Chr14: 1535484-1540483 Populus trichocarpa
Potri.014G015866 5.0kb downstream 5.0kb downstream 8055   true Chr14: 1540484-1548538 Populus trichocarpa
Potri.014G015866 5.0kb downstream 5.0kb downstream 5000   false Chr14: 1543539-1548538 Populus trichocarpa
Potri.014G015866 10.0kb upstream 10.0kb upstream 13055   true Chr14: 1530484-1543538 Populus trichocarpa
Potri.014G015866 10.0kb upstream 10.0kb upstream 10000   false Chr14: 1530484-1540483 Populus trichocarpa
Potri.014G015866 10.0kb downstream 10.0kb downstream 13055   true Chr14: 1540484-1553538 Populus trichocarpa
Potri.014G015866 10.0kb downstream 10.0kb downstream 10000   false Chr14: 1543539-1553538 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458386 5262 Malpighiales View MSA
124240807 5268 Malvidae View MSA
124072896 5270 Rosid View MSA
123736483 5271 Pentapetalae View MSA
122789828 5272 Eudicot View MSA
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain