Gene : Potri.014G115700 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  1207
Name:  ? Potri.014G115700 Secondary Identifier:  ? PAC:37269110
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G115700 0.5kb upstream 0.5kb upstream 2603   true Chr14: 9012873-9015475 Populus trichocarpa
Potri.014G115700 0.5kb upstream 0.5kb upstream 500   false Chr14: 9012873-9013372 Populus trichocarpa
Potri.014G115700 0.5kb downstream 0.5kb downstream 2603   true Chr14: 9013373-9015975 Populus trichocarpa
Potri.014G115700 0.5kb downstream 0.5kb downstream 500   false Chr14: 9015476-9015975 Populus trichocarpa
Potri.014G115700 1.0kb upstream 1.0kb upstream 3103   true Chr14: 9012373-9015475 Populus trichocarpa
Potri.014G115700 1.0kb upstream 1.0kb upstream 1000   false Chr14: 9012373-9013372 Populus trichocarpa
Potri.014G115700 1.0kb downstream 1.0kb downstream 3103   true Chr14: 9013373-9016475 Populus trichocarpa
Potri.014G115700 1.0kb downstream 1.0kb downstream 1000   false Chr14: 9015476-9016475 Populus trichocarpa
Potri.014G115700 2.0kb upstream 2.0kb upstream 4103   true Chr14: 9011373-9015475 Populus trichocarpa
Potri.014G115700 2.0kb upstream 2.0kb upstream 2000   false Chr14: 9011373-9013372 Populus trichocarpa
Potri.014G115700 2.0kb downstream 2.0kb downstream 4103   true Chr14: 9013373-9017475 Populus trichocarpa
Potri.014G115700 2.0kb downstream 2.0kb downstream 2000   false Chr14: 9015476-9017475 Populus trichocarpa
Potri.014G115700 5.0kb upstream 5.0kb upstream 7103   true Chr14: 9008373-9015475 Populus trichocarpa
Potri.014G115700 5.0kb upstream 5.0kb upstream 5000   false Chr14: 9008373-9013372 Populus trichocarpa
Potri.014G115700 5.0kb downstream 5.0kb downstream 7103   true Chr14: 9013373-9020475 Populus trichocarpa
Potri.014G115700 5.0kb downstream 5.0kb downstream 5000   false Chr14: 9015476-9020475 Populus trichocarpa
Potri.014G115700 10.0kb upstream 10.0kb upstream 12103   true Chr14: 9003373-9015475 Populus trichocarpa
Potri.014G115700 10.0kb upstream 10.0kb upstream 10000   false Chr14: 9003373-9013372 Populus trichocarpa
Potri.014G115700 10.0kb downstream 10.0kb downstream 12103   true Chr14: 9013373-9025475 Populus trichocarpa
Potri.014G115700 10.0kb downstream 10.0kb downstream 10000   false Chr14: 9015476-9025475 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450307 5262 Malpighiales View MSA
124249445 5268 Malvidae View MSA
124066514 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain