Gene : Potri.014G083400 P. trichocarpa v3.1
Defline:  (1 of 3) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  880
Name:  ? Potri.014G083400 Secondary Identifier:  ? PAC:37267740
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6689 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G083400 0.5kb upstream 0.5kb upstream 4197   true Chr14: 6576894-6581090 Populus trichocarpa
Potri.014G083400 0.5kb upstream 0.5kb upstream 500   false Chr14: 6580591-6581090 Populus trichocarpa
Potri.014G083400 0.5kb downstream 0.5kb downstream 4197   true Chr14: 6576394-6580590 Populus trichocarpa
Potri.014G083400 0.5kb downstream 0.5kb downstream 500   false Chr14: 6576394-6576893 Populus trichocarpa
Potri.014G083400 1.0kb upstream 1.0kb upstream 4697   true Chr14: 6576894-6581590 Populus trichocarpa
Potri.014G083400 1.0kb upstream 1.0kb upstream 1000   false Chr14: 6580591-6581590 Populus trichocarpa
Potri.014G083400 1.0kb downstream 1.0kb downstream 4697   true Chr14: 6575894-6580590 Populus trichocarpa
Potri.014G083400 1.0kb downstream 1.0kb downstream 1000   false Chr14: 6575894-6576893 Populus trichocarpa
Potri.014G083400 2.0kb upstream 2.0kb upstream 5697   true Chr14: 6576894-6582590 Populus trichocarpa
Potri.014G083400 2.0kb upstream 2.0kb upstream 2000   false Chr14: 6580591-6582590 Populus trichocarpa
Potri.014G083400 2.0kb downstream 2.0kb downstream 5697   true Chr14: 6574894-6580590 Populus trichocarpa
Potri.014G083400 2.0kb downstream 2.0kb downstream 2000   false Chr14: 6574894-6576893 Populus trichocarpa
Potri.014G083400 5.0kb upstream 5.0kb upstream 8697   true Chr14: 6576894-6585590 Populus trichocarpa
Potri.014G083400 5.0kb upstream 5.0kb upstream 5000   false Chr14: 6580591-6585590 Populus trichocarpa
Potri.014G083400 5.0kb downstream 5.0kb downstream 8697   true Chr14: 6571894-6580590 Populus trichocarpa
Potri.014G083400 5.0kb downstream 5.0kb downstream 5000   false Chr14: 6571894-6576893 Populus trichocarpa
Potri.014G083400 10.0kb upstream 10.0kb upstream 13697   true Chr14: 6576894-6590590 Populus trichocarpa
Potri.014G083400 10.0kb upstream 10.0kb upstream 10000   false Chr14: 6580591-6590590 Populus trichocarpa
Potri.014G083400 10.0kb downstream 10.0kb downstream 13697   true Chr14: 6566894-6580590 Populus trichocarpa
Potri.014G083400 10.0kb downstream 10.0kb downstream 10000   false Chr14: 6566894-6576893 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780848 5273 Angiosperm View MSA
122427001 5262 Malpighiales View MSA
124217411 5268 Malvidae View MSA
124038584 5270 Rosid View MSA
123748078 5271 Pentapetalae View MSA
122772424 5272 Eudicot View MSA
121052447 5274 Embryophyte View MSA
123092494 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain