Gene : Potri.014G130800 P. trichocarpa v3.1

Defline:  (1 of 1) K10858 - DNA mismatch repair protein PMS2 (PMS2) Genomic Order:  1363
Name:  ? Potri.014G130800 Secondary Identifier:  ? PAC:37269169

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G130800 0.5kb upstream 0.5kb upstream 7326   true Chr14: 9968693-9976018 Populus trichocarpa
Potri.014G130800 0.5kb upstream 0.5kb upstream 500   false Chr14: 9975519-9976018 Populus trichocarpa
Potri.014G130800 0.5kb downstream 0.5kb downstream 7326   true Chr14: 9968193-9975518 Populus trichocarpa
Potri.014G130800 0.5kb downstream 0.5kb downstream 500   false Chr14: 9968193-9968692 Populus trichocarpa
Potri.014G130800 1.0kb upstream 1.0kb upstream 7826   true Chr14: 9968693-9976518 Populus trichocarpa
Potri.014G130800 1.0kb upstream 1.0kb upstream 1000   false Chr14: 9975519-9976518 Populus trichocarpa
Potri.014G130800 1.0kb downstream 1.0kb downstream 7826   true Chr14: 9967693-9975518 Populus trichocarpa
Potri.014G130800 1.0kb downstream 1.0kb downstream 1000   false Chr14: 9967693-9968692 Populus trichocarpa
Potri.014G130800 2.0kb upstream 2.0kb upstream 8826   true Chr14: 9968693-9977518 Populus trichocarpa
Potri.014G130800 2.0kb upstream 2.0kb upstream 2000   false Chr14: 9975519-9977518 Populus trichocarpa
Potri.014G130800 2.0kb downstream 2.0kb downstream 8826   true Chr14: 9966693-9975518 Populus trichocarpa
Potri.014G130800 2.0kb downstream 2.0kb downstream 2000   false Chr14: 9966693-9968692 Populus trichocarpa
Potri.014G130800 5.0kb upstream 5.0kb upstream 11826   true Chr14: 9968693-9980518 Populus trichocarpa
Potri.014G130800 5.0kb upstream 5.0kb upstream 5000   false Chr14: 9975519-9980518 Populus trichocarpa
Potri.014G130800 5.0kb downstream 5.0kb downstream 11826   true Chr14: 9963693-9975518 Populus trichocarpa
Potri.014G130800 5.0kb downstream 5.0kb downstream 5000   false Chr14: 9963693-9968692 Populus trichocarpa
Potri.014G130800 10.0kb upstream 10.0kb upstream 16826   true Chr14: 9968693-9985518 Populus trichocarpa
Potri.014G130800 10.0kb upstream 10.0kb upstream 10000   false Chr14: 9975519-9985518 Populus trichocarpa
Potri.014G130800 10.0kb downstream 10.0kb downstream 16826   true Chr14: 9958693-9975518 Populus trichocarpa
Potri.014G130800 10.0kb downstream 10.0kb downstream 10000   false Chr14: 9958693-9968692 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449245 5262 Malpighiales View MSA
124239053 5268 Malvidae View MSA
124067579 5270 Rosid View MSA
123747689 5271 Pentapetalae View MSA
122789858 5272 Eudicot View MSA
122044481 5273 Angiosperm View MSA
121344102 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain