Gene : Potri.015G022100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  228
Name:  ? Potri.015G022100 Secondary Identifier:  ? PAC:37254553
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G022100 0.5kb upstream 0.5kb upstream 4491 true Chr15: 1695093-1699583 Populus trichocarpa
Potri.015G022100 0.5kb upstream 0.5kb upstream 500 false Chr15: 1699084-1699583 Populus trichocarpa
Potri.015G022100 0.5kb downstream 0.5kb downstream 4491 true Chr15: 1694593-1699083 Populus trichocarpa
Potri.015G022100 0.5kb downstream 0.5kb downstream 500 false Chr15: 1694593-1695092 Populus trichocarpa
Potri.015G022100 1.0kb upstream 1.0kb upstream 4991 true Chr15: 1695093-1700083 Populus trichocarpa
Potri.015G022100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1699084-1700083 Populus trichocarpa
Potri.015G022100 1.0kb downstream 1.0kb downstream 4991 true Chr15: 1694093-1699083 Populus trichocarpa
Potri.015G022100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1694093-1695092 Populus trichocarpa
Potri.015G022100 2.0kb upstream 2.0kb upstream 5991 true Chr15: 1695093-1701083 Populus trichocarpa
Potri.015G022100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1699084-1701083 Populus trichocarpa
Potri.015G022100 2.0kb downstream 2.0kb downstream 5991 true Chr15: 1693093-1699083 Populus trichocarpa
Potri.015G022100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1693093-1695092 Populus trichocarpa
Potri.015G022100 5.0kb upstream 5.0kb upstream 8991 true Chr15: 1695093-1704083 Populus trichocarpa
Potri.015G022100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1699084-1704083 Populus trichocarpa
Potri.015G022100 5.0kb downstream 5.0kb downstream 8991 true Chr15: 1690093-1699083 Populus trichocarpa
Potri.015G022100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1690093-1695092 Populus trichocarpa
Potri.015G022100 10.0kb upstream 10.0kb upstream 13991 true Chr15: 1695093-1709083 Populus trichocarpa
Potri.015G022100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1699084-1709083 Populus trichocarpa
Potri.015G022100 10.0kb downstream 10.0kb downstream 13991 true Chr15: 1685093-1699083 Populus trichocarpa
Potri.015G022100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1685093-1695092 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026363 5273 Angiosperm View MSA
122452129 5262 Malpighiales View MSA
124246245 5268 Malvidae View MSA
124065012 5270 Rosid View MSA
123740689 5271 Pentapetalae View MSA
122788659 5272 Eudicot View MSA
121349199 5274 Embryophyte View MSA
123381214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain