Gene : Potri.015G018900 P. trichocarpa v3.1
Defline:  (1 of 4) K00797 - spermidine synthase (speE, SRM) Genomic Order:  194
Name:  ? Potri.015G018900 Secondary Identifier:  ? PAC:37253556
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ARGSPECAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa BSUBPOLYAMSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa POLYAMINSYN3-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-7528 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G018900 0.5kb upstream 0.5kb upstream 5813 true Chr15: 1343033-1348845 Populus trichocarpa
Potri.015G018900 0.5kb upstream 0.5kb upstream 500 false Chr15: 1343033-1343532 Populus trichocarpa
Potri.015G018900 0.5kb downstream 0.5kb downstream 5813 true Chr15: 1343533-1349345 Populus trichocarpa
Potri.015G018900 0.5kb downstream 0.5kb downstream 500 false Chr15: 1348846-1349345 Populus trichocarpa
Potri.015G018900 1.0kb upstream 1.0kb upstream 6313 true Chr15: 1342533-1348845 Populus trichocarpa
Potri.015G018900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1342533-1343532 Populus trichocarpa
Potri.015G018900 1.0kb downstream 1.0kb downstream 6313 true Chr15: 1343533-1349845 Populus trichocarpa
Potri.015G018900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1348846-1349845 Populus trichocarpa
Potri.015G018900 2.0kb upstream 2.0kb upstream 7313 true Chr15: 1341533-1348845 Populus trichocarpa
Potri.015G018900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1341533-1343532 Populus trichocarpa
Potri.015G018900 2.0kb downstream 2.0kb downstream 7313 true Chr15: 1343533-1350845 Populus trichocarpa
Potri.015G018900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1348846-1350845 Populus trichocarpa
Potri.015G018900 5.0kb upstream 5.0kb upstream 10313 true Chr15: 1338533-1348845 Populus trichocarpa
Potri.015G018900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1338533-1343532 Populus trichocarpa
Potri.015G018900 5.0kb downstream 5.0kb downstream 10313 true Chr15: 1343533-1353845 Populus trichocarpa
Potri.015G018900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1348846-1353845 Populus trichocarpa
Potri.015G018900 10.0kb upstream 10.0kb upstream 15313 true Chr15: 1333533-1348845 Populus trichocarpa
Potri.015G018900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1333533-1343532 Populus trichocarpa
Potri.015G018900 10.0kb downstream 10.0kb downstream 15313 true Chr15: 1343533-1358845 Populus trichocarpa
Potri.015G018900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1348846-1358845 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464769 5262 Malpighiales View MSA
124251479 5268 Malvidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain