Gene : Potri.014G195800 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR33447//PTHR33447:SF2 - FAMILY NOT NAMED // PROTEIN PCS-1, ISOFORM A Genomic Order:  2020
Name:  ? Potri.014G195800 Secondary Identifier:  ? PAC:37268816

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6745 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G195800 0.5kb upstream 0.5kb upstream 6998   true Chr14: 18521691-18528688 Populus trichocarpa
Potri.014G195800 0.5kb upstream 0.5kb upstream 500   false Chr14: 18521691-18522190 Populus trichocarpa
Potri.014G195800 0.5kb downstream 0.5kb downstream 6998   true Chr14: 18522191-18529188 Populus trichocarpa
Potri.014G195800 0.5kb downstream 0.5kb downstream 500   false Chr14: 18528689-18529188 Populus trichocarpa
Potri.014G195800 1.0kb upstream 1.0kb upstream 7498   true Chr14: 18521191-18528688 Populus trichocarpa
Potri.014G195800 1.0kb upstream 1.0kb upstream 1000   false Chr14: 18521191-18522190 Populus trichocarpa
Potri.014G195800 1.0kb downstream 1.0kb downstream 7498   true Chr14: 18522191-18529688 Populus trichocarpa
Potri.014G195800 1.0kb downstream 1.0kb downstream 1000   false Chr14: 18528689-18529688 Populus trichocarpa
Potri.014G195800 2.0kb upstream 2.0kb upstream 8498   true Chr14: 18520191-18528688 Populus trichocarpa
Potri.014G195800 2.0kb upstream 2.0kb upstream 2000   false Chr14: 18520191-18522190 Populus trichocarpa
Potri.014G195800 2.0kb downstream 2.0kb downstream 8498   true Chr14: 18522191-18530688 Populus trichocarpa
Potri.014G195800 2.0kb downstream 2.0kb downstream 2000   false Chr14: 18528689-18530688 Populus trichocarpa
Potri.014G195800 5.0kb upstream 5.0kb upstream 11498   true Chr14: 18517191-18528688 Populus trichocarpa
Potri.014G195800 5.0kb upstream 5.0kb upstream 5000   false Chr14: 18517191-18522190 Populus trichocarpa
Potri.014G195800 5.0kb downstream 5.0kb downstream 11498   true Chr14: 18522191-18533688 Populus trichocarpa
Potri.014G195800 5.0kb downstream 5.0kb downstream 5000   false Chr14: 18528689-18533688 Populus trichocarpa
Potri.014G195800 10.0kb upstream 10.0kb upstream 16498   true Chr14: 18512191-18528688 Populus trichocarpa
Potri.014G195800 10.0kb upstream 10.0kb upstream 10000   false Chr14: 18512191-18522190 Populus trichocarpa
Potri.014G195800 10.0kb downstream 10.0kb downstream 16498   true Chr14: 18522191-18538688 Populus trichocarpa
Potri.014G195800 10.0kb downstream 10.0kb downstream 10000   false Chr14: 18528689-18538688 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459637 5262 Malpighiales View MSA
124237601 5268 Malvidae View MSA
124068686 5270 Rosid View MSA
123741810 5271 Pentapetalae View MSA
122787952 5272 Eudicot View MSA
122042106 5273 Angiosperm View MSA
123429015 5275 Viridiplantae View MSA
121309923 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain