Gene : Potri.016G018100 P. trichocarpa v3.1

Defline:  (1 of 27) PF03101//PF04434//PF10551 - FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  189
Name:  ? Potri.016G018100 Secondary Identifier:  ? PAC:37250203

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G018100 0.5kb upstream 0.5kb upstream 6846 true Chr16: 968052-974897 Populus trichocarpa
Potri.016G018100 0.5kb upstream 0.5kb upstream 500 false Chr16: 974398-974897 Populus trichocarpa
Potri.016G018100 0.5kb downstream 0.5kb downstream 6846 true Chr16: 967552-974397 Populus trichocarpa
Potri.016G018100 0.5kb downstream 0.5kb downstream 500 false Chr16: 967552-968051 Populus trichocarpa
Potri.016G018100 1.0kb upstream 1.0kb upstream 7346 true Chr16: 968052-975397 Populus trichocarpa
Potri.016G018100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 974398-975397 Populus trichocarpa
Potri.016G018100 1.0kb downstream 1.0kb downstream 7346 true Chr16: 967052-974397 Populus trichocarpa
Potri.016G018100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 967052-968051 Populus trichocarpa
Potri.016G018100 2.0kb upstream 2.0kb upstream 8346 true Chr16: 968052-976397 Populus trichocarpa
Potri.016G018100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 974398-976397 Populus trichocarpa
Potri.016G018100 2.0kb downstream 2.0kb downstream 8346 true Chr16: 966052-974397 Populus trichocarpa
Potri.016G018100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 966052-968051 Populus trichocarpa
Potri.016G018100 5.0kb upstream 5.0kb upstream 11346 true Chr16: 968052-979397 Populus trichocarpa
Potri.016G018100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 974398-979397 Populus trichocarpa
Potri.016G018100 5.0kb downstream 5.0kb downstream 11346 true Chr16: 963052-974397 Populus trichocarpa
Potri.016G018100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 963052-968051 Populus trichocarpa
Potri.016G018100 10.0kb upstream 10.0kb upstream 16346 true Chr16: 968052-984397 Populus trichocarpa
Potri.016G018100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 974398-984397 Populus trichocarpa
Potri.016G018100 10.0kb downstream 10.0kb downstream 16346 true Chr16: 958052-974397 Populus trichocarpa
Potri.016G018100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 958052-968051 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462156 5262 Malpighiales View MSA
124240246 5268 Malvidae View MSA
124066403 5270 Rosid View MSA
123740351 5271 Pentapetalae View MSA
122769975 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain