Gene : Potri.016G010900 P. trichocarpa v3.1
Defline:  (1 of 15) PTHR23130:SF80 - AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12 Genomic Order:  117
Name:  ? Potri.016G010900 Secondary Identifier:  ? PAC:37249206
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G010900 0.5kb upstream 0.5kb upstream 2507 true Chr16: 550740-553246 Populus trichocarpa
Potri.016G010900 0.5kb upstream 0.5kb upstream 500 false Chr16: 550740-551239 Populus trichocarpa
Potri.016G010900 0.5kb downstream 0.5kb downstream 2507 true Chr16: 551240-553746 Populus trichocarpa
Potri.016G010900 0.5kb downstream 0.5kb downstream 500 false Chr16: 553247-553746 Populus trichocarpa
Potri.016G010900 1.0kb upstream 1.0kb upstream 3007 true Chr16: 550240-553246 Populus trichocarpa
Potri.016G010900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 550240-551239 Populus trichocarpa
Potri.016G010900 1.0kb downstream 1.0kb downstream 3007 true Chr16: 551240-554246 Populus trichocarpa
Potri.016G010900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 553247-554246 Populus trichocarpa
Potri.016G010900 2.0kb upstream 2.0kb upstream 4007 true Chr16: 549240-553246 Populus trichocarpa
Potri.016G010900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 549240-551239 Populus trichocarpa
Potri.016G010900 2.0kb downstream 2.0kb downstream 4007 true Chr16: 551240-555246 Populus trichocarpa
Potri.016G010900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 553247-555246 Populus trichocarpa
Potri.016G010900 5.0kb upstream 5.0kb upstream 7007 true Chr16: 546240-553246 Populus trichocarpa
Potri.016G010900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 546240-551239 Populus trichocarpa
Potri.016G010900 5.0kb downstream 5.0kb downstream 7007 true Chr16: 551240-558246 Populus trichocarpa
Potri.016G010900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 553247-558246 Populus trichocarpa
Potri.016G010900 10.0kb upstream 10.0kb upstream 12007 true Chr16: 541240-553246 Populus trichocarpa
Potri.016G010900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 541240-551239 Populus trichocarpa
Potri.016G010900 10.0kb downstream 10.0kb downstream 12007 true Chr16: 551240-563246 Populus trichocarpa
Potri.016G010900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 553247-563246 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461034 5262 Malpighiales View MSA
124244008 5268 Malvidae View MSA
124067428 5270 Rosid View MSA
123738562 5271 Pentapetalae View MSA
122796181 5272 Eudicot View MSA
122050744 5273 Angiosperm View MSA
121348347 5274 Embryophyte View MSA
123428624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain