Gene : Potri.015G128300 P. trichocarpa v3.1

Defline:  (1 of 3) PTHR31080//PTHR31080:SF19 - FAMILY NOT NAMED // PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Genomic Order:  1317
Name:  ? Potri.015G128300 Secondary Identifier:  ? PAC:37255178

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G128300 0.5kb upstream 0.5kb upstream 1604 true Chr15: 14020411-14022014 Populus trichocarpa
Potri.015G128300 0.5kb upstream 0.5kb upstream 500 false Chr15: 14021515-14022014 Populus trichocarpa
Potri.015G128300 0.5kb downstream 0.5kb downstream 1604 true Chr15: 14019911-14021514 Populus trichocarpa
Potri.015G128300 0.5kb downstream 0.5kb downstream 500 false Chr15: 14019911-14020410 Populus trichocarpa
Potri.015G128300 1.0kb upstream 1.0kb upstream 2104 true Chr15: 14020411-14022514 Populus trichocarpa
Potri.015G128300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 14021515-14022514 Populus trichocarpa
Potri.015G128300 1.0kb downstream 1.0kb downstream 2104 true Chr15: 14019411-14021514 Populus trichocarpa
Potri.015G128300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 14019411-14020410 Populus trichocarpa
Potri.015G128300 2.0kb upstream 2.0kb upstream 3104 true Chr15: 14020411-14023514 Populus trichocarpa
Potri.015G128300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 14021515-14023514 Populus trichocarpa
Potri.015G128300 2.0kb downstream 2.0kb downstream 3104 true Chr15: 14018411-14021514 Populus trichocarpa
Potri.015G128300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 14018411-14020410 Populus trichocarpa
Potri.015G128300 5.0kb upstream 5.0kb upstream 6104 true Chr15: 14020411-14026514 Populus trichocarpa
Potri.015G128300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 14021515-14026514 Populus trichocarpa
Potri.015G128300 5.0kb downstream 5.0kb downstream 6104 true Chr15: 14015411-14021514 Populus trichocarpa
Potri.015G128300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 14015411-14020410 Populus trichocarpa
Potri.015G128300 10.0kb upstream 10.0kb upstream 11104 true Chr15: 14020411-14031514 Populus trichocarpa
Potri.015G128300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 14021515-14031514 Populus trichocarpa
Potri.015G128300 10.0kb downstream 10.0kb downstream 11104 true Chr15: 14010411-14021514 Populus trichocarpa
Potri.015G128300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 14010411-14020410 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460645 5262 Malpighiales View MSA
124242648 5268 Malvidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain