Gene : Potri.016G075400 P. trichocarpa v3.1
Defline:  (1 of 6) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  778
Name:  ? Potri.016G075400 Secondary Identifier:  ? PAC:37250867
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G075400 0.5kb upstream 0.5kb upstream 1481 true Chr16: 5695891-5697371 Populus trichocarpa
Potri.016G075400 0.5kb upstream 0.5kb upstream 500 false Chr16: 5696872-5697371 Populus trichocarpa
Potri.016G075400 0.5kb downstream 0.5kb downstream 1481 true Chr16: 5695391-5696871 Populus trichocarpa
Potri.016G075400 0.5kb downstream 0.5kb downstream 500 false Chr16: 5695391-5695890 Populus trichocarpa
Potri.016G075400 1.0kb upstream 1.0kb upstream 1981 true Chr16: 5695891-5697871 Populus trichocarpa
Potri.016G075400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5696872-5697871 Populus trichocarpa
Potri.016G075400 1.0kb downstream 1.0kb downstream 1981 true Chr16: 5694891-5696871 Populus trichocarpa
Potri.016G075400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5694891-5695890 Populus trichocarpa
Potri.016G075400 2.0kb upstream 2.0kb upstream 2981 true Chr16: 5695891-5698871 Populus trichocarpa
Potri.016G075400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5696872-5698871 Populus trichocarpa
Potri.016G075400 2.0kb downstream 2.0kb downstream 2981 true Chr16: 5693891-5696871 Populus trichocarpa
Potri.016G075400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5693891-5695890 Populus trichocarpa
Potri.016G075400 5.0kb upstream 5.0kb upstream 5981 true Chr16: 5695891-5701871 Populus trichocarpa
Potri.016G075400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5696872-5701871 Populus trichocarpa
Potri.016G075400 5.0kb downstream 5.0kb downstream 5981 true Chr16: 5690891-5696871 Populus trichocarpa
Potri.016G075400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5690891-5695890 Populus trichocarpa
Potri.016G075400 10.0kb upstream 10.0kb upstream 10981 true Chr16: 5695891-5706871 Populus trichocarpa
Potri.016G075400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5696872-5706871 Populus trichocarpa
Potri.016G075400 10.0kb downstream 10.0kb downstream 10981 true Chr16: 5685891-5696871 Populus trichocarpa
Potri.016G075400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5685891-5695890 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464428 5262 Malpighiales View MSA
124251067 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain