Gene : Potri.016G075300 P. trichocarpa v3.1
Defline:  (1 of 6) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  777
Name:  ? Potri.016G075300 Secondary Identifier:  ? PAC:37250004
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G075300 0.5kb upstream 0.5kb upstream 1342 true Chr16: 5690993-5692334 Populus trichocarpa
Potri.016G075300 0.5kb upstream 0.5kb upstream 500 false Chr16: 5691835-5692334 Populus trichocarpa
Potri.016G075300 0.5kb downstream 0.5kb downstream 1342 true Chr16: 5690493-5691834 Populus trichocarpa
Potri.016G075300 0.5kb downstream 0.5kb downstream 500 false Chr16: 5690493-5690992 Populus trichocarpa
Potri.016G075300 1.0kb upstream 1.0kb upstream 1842 true Chr16: 5690993-5692834 Populus trichocarpa
Potri.016G075300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5691835-5692834 Populus trichocarpa
Potri.016G075300 1.0kb downstream 1.0kb downstream 1842 true Chr16: 5689993-5691834 Populus trichocarpa
Potri.016G075300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5689993-5690992 Populus trichocarpa
Potri.016G075300 2.0kb upstream 2.0kb upstream 2842 true Chr16: 5690993-5693834 Populus trichocarpa
Potri.016G075300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5691835-5693834 Populus trichocarpa
Potri.016G075300 2.0kb downstream 2.0kb downstream 2842 true Chr16: 5688993-5691834 Populus trichocarpa
Potri.016G075300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5688993-5690992 Populus trichocarpa
Potri.016G075300 5.0kb upstream 5.0kb upstream 5842 true Chr16: 5690993-5696834 Populus trichocarpa
Potri.016G075300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5691835-5696834 Populus trichocarpa
Potri.016G075300 5.0kb downstream 5.0kb downstream 5842 true Chr16: 5685993-5691834 Populus trichocarpa
Potri.016G075300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5685993-5690992 Populus trichocarpa
Potri.016G075300 10.0kb upstream 10.0kb upstream 10842 true Chr16: 5690993-5701834 Populus trichocarpa
Potri.016G075300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5691835-5701834 Populus trichocarpa
Potri.016G075300 10.0kb downstream 10.0kb downstream 10842 true Chr16: 5680993-5691834 Populus trichocarpa
Potri.016G075300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5680993-5690992 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464428 5262 Malpighiales View MSA
124251067 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain