Gene : Potri.016G079600 P. trichocarpa v3.1

Defline:  (1 of 8) K01674 - carbonic anhydrase (cah) Genomic Order:  820
Name:  ? Potri.016G079600 Secondary Identifier:  ? PAC:37249160

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CYANCAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-241 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7115 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7117 Populus trichocarpa pathologic  
Ptrichocarpa PWYQT-4429 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G079600 0.5kb upstream 0.5kb upstream 3792 true Chr16: 6100298-6104089 Populus trichocarpa
Potri.016G079600 0.5kb upstream 0.5kb upstream 500 false Chr16: 6103590-6104089 Populus trichocarpa
Potri.016G079600 0.5kb downstream 0.5kb downstream 3792 true Chr16: 6099798-6103589 Populus trichocarpa
Potri.016G079600 0.5kb downstream 0.5kb downstream 500 false Chr16: 6099798-6100297 Populus trichocarpa
Potri.016G079600 1.0kb upstream 1.0kb upstream 4292 true Chr16: 6100298-6104589 Populus trichocarpa
Potri.016G079600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6103590-6104589 Populus trichocarpa
Potri.016G079600 1.0kb downstream 1.0kb downstream 4292 true Chr16: 6099298-6103589 Populus trichocarpa
Potri.016G079600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6099298-6100297 Populus trichocarpa
Potri.016G079600 2.0kb upstream 2.0kb upstream 5292 true Chr16: 6100298-6105589 Populus trichocarpa
Potri.016G079600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6103590-6105589 Populus trichocarpa
Potri.016G079600 2.0kb downstream 2.0kb downstream 5292 true Chr16: 6098298-6103589 Populus trichocarpa
Potri.016G079600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6098298-6100297 Populus trichocarpa
Potri.016G079600 5.0kb upstream 5.0kb upstream 8292 true Chr16: 6100298-6108589 Populus trichocarpa
Potri.016G079600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6103590-6108589 Populus trichocarpa
Potri.016G079600 5.0kb downstream 5.0kb downstream 8292 true Chr16: 6095298-6103589 Populus trichocarpa
Potri.016G079600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6095298-6100297 Populus trichocarpa
Potri.016G079600 10.0kb upstream 10.0kb upstream 13292 true Chr16: 6100298-6113589 Populus trichocarpa
Potri.016G079600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6103590-6113589 Populus trichocarpa
Potri.016G079600 10.0kb downstream 10.0kb downstream 13292 true Chr16: 6090298-6103589 Populus trichocarpa
Potri.016G079600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6090298-6100297 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459860 5262 Malpighiales View MSA
124246134 5268 Malvidae View MSA
124069270 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain