Gene : Potri.016G062100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR14969:SF3 - DIHYDROSPHINGOSINE 1-PHOSPHATE PHOSPHATASE LCB3-RELATED Genomic Order:  639
Name:  ? Potri.016G062100 Secondary Identifier:  ? PAC:37250486
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRIGLSYN-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G062100 0.5kb upstream 0.5kb upstream 5048 true Chr16: 4357848-4362895 Populus trichocarpa
Potri.016G062100 0.5kb upstream 0.5kb upstream 500 false Chr16: 4362396-4362895 Populus trichocarpa
Potri.016G062100 0.5kb downstream 0.5kb downstream 5048 true Chr16: 4357348-4362395 Populus trichocarpa
Potri.016G062100 0.5kb downstream 0.5kb downstream 500 false Chr16: 4357348-4357847 Populus trichocarpa
Potri.016G062100 1.0kb upstream 1.0kb upstream 5548 true Chr16: 4357848-4363395 Populus trichocarpa
Potri.016G062100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4362396-4363395 Populus trichocarpa
Potri.016G062100 1.0kb downstream 1.0kb downstream 5548 true Chr16: 4356848-4362395 Populus trichocarpa
Potri.016G062100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4356848-4357847 Populus trichocarpa
Potri.016G062100 2.0kb upstream 2.0kb upstream 6548 true Chr16: 4357848-4364395 Populus trichocarpa
Potri.016G062100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4362396-4364395 Populus trichocarpa
Potri.016G062100 2.0kb downstream 2.0kb downstream 6548 true Chr16: 4355848-4362395 Populus trichocarpa
Potri.016G062100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4355848-4357847 Populus trichocarpa
Potri.016G062100 5.0kb upstream 5.0kb upstream 9548 true Chr16: 4357848-4367395 Populus trichocarpa
Potri.016G062100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4362396-4367395 Populus trichocarpa
Potri.016G062100 5.0kb downstream 5.0kb downstream 9548 true Chr16: 4352848-4362395 Populus trichocarpa
Potri.016G062100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4352848-4357847 Populus trichocarpa
Potri.016G062100 10.0kb upstream 10.0kb upstream 14548 true Chr16: 4357848-4372395 Populus trichocarpa
Potri.016G062100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4362396-4372395 Populus trichocarpa
Potri.016G062100 10.0kb downstream 10.0kb downstream 14548 true Chr16: 4347848-4362395 Populus trichocarpa
Potri.016G062100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4347848-4357847 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453076 5262 Malpighiales View MSA
124241602 5268 Malvidae View MSA
124061101 5270 Rosid View MSA
123739708 5271 Pentapetalae View MSA
122787223 5272 Eudicot View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain