Gene : Potri.016G066000 P. trichocarpa v3.1
Defline:  (1 of 2) K09835 - prolycopene isomerase (crtISO, crtH) Genomic Order:  678
Name:  ? Potri.016G066000 Secondary Identifier:  ? PAC:37250861
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CAROTENOID-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6475 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G066000 0.5kb upstream 0.5kb upstream 6751 true Chr16: 4651405-4658155 Populus trichocarpa
Potri.016G066000 0.5kb upstream 0.5kb upstream 500 false Chr16: 4657656-4658155 Populus trichocarpa
Potri.016G066000 0.5kb downstream 0.5kb downstream 6751 true Chr16: 4650905-4657655 Populus trichocarpa
Potri.016G066000 0.5kb downstream 0.5kb downstream 500 false Chr16: 4650905-4651404 Populus trichocarpa
Potri.016G066000 1.0kb upstream 1.0kb upstream 7251 true Chr16: 4651405-4658655 Populus trichocarpa
Potri.016G066000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4657656-4658655 Populus trichocarpa
Potri.016G066000 1.0kb downstream 1.0kb downstream 7251 true Chr16: 4650405-4657655 Populus trichocarpa
Potri.016G066000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4650405-4651404 Populus trichocarpa
Potri.016G066000 2.0kb upstream 2.0kb upstream 8251 true Chr16: 4651405-4659655 Populus trichocarpa
Potri.016G066000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4657656-4659655 Populus trichocarpa
Potri.016G066000 2.0kb downstream 2.0kb downstream 8251 true Chr16: 4649405-4657655 Populus trichocarpa
Potri.016G066000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4649405-4651404 Populus trichocarpa
Potri.016G066000 5.0kb upstream 5.0kb upstream 11251 true Chr16: 4651405-4662655 Populus trichocarpa
Potri.016G066000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4657656-4662655 Populus trichocarpa
Potri.016G066000 5.0kb downstream 5.0kb downstream 11251 true Chr16: 4646405-4657655 Populus trichocarpa
Potri.016G066000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4646405-4651404 Populus trichocarpa
Potri.016G066000 10.0kb upstream 10.0kb upstream 16251 true Chr16: 4651405-4667655 Populus trichocarpa
Potri.016G066000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4657656-4667655 Populus trichocarpa
Potri.016G066000 10.0kb downstream 10.0kb downstream 16251 true Chr16: 4641405-4657655 Populus trichocarpa
Potri.016G066000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4641405-4651404 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026345 5273 Angiosperm View MSA
122458621 5262 Malpighiales View MSA
124242220 5268 Malvidae View MSA
124064637 5270 Rosid View MSA
123738016 5271 Pentapetalae View MSA
122791420 5272 Eudicot View MSA
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain