Gene : Potri.016G053500 P. trichocarpa v3.1
Defline:  (1 of 79) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  550
Name:  ? Potri.016G053500 Secondary Identifier:  ? PAC:37249797
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G053500 0.5kb upstream 0.5kb upstream 3129 true Chr16: 3461233-3464361 Populus trichocarpa
Potri.016G053500 0.5kb upstream 0.5kb upstream 500 false Chr16: 3461233-3461732 Populus trichocarpa
Potri.016G053500 0.5kb downstream 0.5kb downstream 3129 true Chr16: 3461733-3464861 Populus trichocarpa
Potri.016G053500 0.5kb downstream 0.5kb downstream 500 false Chr16: 3464362-3464861 Populus trichocarpa
Potri.016G053500 1.0kb upstream 1.0kb upstream 3629 true Chr16: 3460733-3464361 Populus trichocarpa
Potri.016G053500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3460733-3461732 Populus trichocarpa
Potri.016G053500 1.0kb downstream 1.0kb downstream 3629 true Chr16: 3461733-3465361 Populus trichocarpa
Potri.016G053500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3464362-3465361 Populus trichocarpa
Potri.016G053500 2.0kb upstream 2.0kb upstream 4629 true Chr16: 3459733-3464361 Populus trichocarpa
Potri.016G053500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3459733-3461732 Populus trichocarpa
Potri.016G053500 2.0kb downstream 2.0kb downstream 4629 true Chr16: 3461733-3466361 Populus trichocarpa
Potri.016G053500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3464362-3466361 Populus trichocarpa
Potri.016G053500 5.0kb upstream 5.0kb upstream 7629 true Chr16: 3456733-3464361 Populus trichocarpa
Potri.016G053500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3456733-3461732 Populus trichocarpa
Potri.016G053500 5.0kb downstream 5.0kb downstream 7629 true Chr16: 3461733-3469361 Populus trichocarpa
Potri.016G053500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3464362-3469361 Populus trichocarpa
Potri.016G053500 10.0kb upstream 10.0kb upstream 12629 true Chr16: 3451733-3464361 Populus trichocarpa
Potri.016G053500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3451733-3461732 Populus trichocarpa
Potri.016G053500 10.0kb downstream 10.0kb downstream 12629 true Chr16: 3461733-3474361 Populus trichocarpa
Potri.016G053500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3464362-3474361 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455553 5262 Malpighiales View MSA
124252420 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain