Gene : Potri.016G053100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10887:SF366 - DNA-BINDING PROTEIN-RELATED Genomic Order:  546
Name:  ? Potri.016G053100 Secondary Identifier:  ? PAC:37250864
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G053100 0.5kb upstream 0.5kb upstream 1956 true Chr16: 3436651-3438606 Populus trichocarpa
Potri.016G053100 0.5kb upstream 0.5kb upstream 500 false Chr16: 3436651-3437150 Populus trichocarpa
Potri.016G053100 0.5kb downstream 0.5kb downstream 1956 true Chr16: 3437151-3439106 Populus trichocarpa
Potri.016G053100 0.5kb downstream 0.5kb downstream 500 false Chr16: 3438607-3439106 Populus trichocarpa
Potri.016G053100 1.0kb upstream 1.0kb upstream 2456 true Chr16: 3436151-3438606 Populus trichocarpa
Potri.016G053100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3436151-3437150 Populus trichocarpa
Potri.016G053100 1.0kb downstream 1.0kb downstream 2456 true Chr16: 3437151-3439606 Populus trichocarpa
Potri.016G053100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3438607-3439606 Populus trichocarpa
Potri.016G053100 2.0kb upstream 2.0kb upstream 3456 true Chr16: 3435151-3438606 Populus trichocarpa
Potri.016G053100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3435151-3437150 Populus trichocarpa
Potri.016G053100 2.0kb downstream 2.0kb downstream 3456 true Chr16: 3437151-3440606 Populus trichocarpa
Potri.016G053100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3438607-3440606 Populus trichocarpa
Potri.016G053100 5.0kb upstream 5.0kb upstream 6456 true Chr16: 3432151-3438606 Populus trichocarpa
Potri.016G053100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3432151-3437150 Populus trichocarpa
Potri.016G053100 5.0kb downstream 5.0kb downstream 6456 true Chr16: 3437151-3443606 Populus trichocarpa
Potri.016G053100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3438607-3443606 Populus trichocarpa
Potri.016G053100 10.0kb upstream 10.0kb upstream 11456 true Chr16: 3427151-3438606 Populus trichocarpa
Potri.016G053100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3427151-3437150 Populus trichocarpa
Potri.016G053100 10.0kb downstream 10.0kb downstream 11456 true Chr16: 3437151-3448606 Populus trichocarpa
Potri.016G053100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3438607-3448606 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029642 5273 Angiosperm View MSA
122399346 5262 Malpighiales View MSA
124196163 5268 Malvidae View MSA
123916422 5270 Rosid View MSA
123497144 5271 Pentapetalae View MSA
122532300 5272 Eudicot View MSA
121298948 5274 Embryophyte View MSA
123336884 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain