Gene : Potri.016G054900 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR13301//PTHR13301:SF79 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  564
Name:  ? Potri.016G054900 Secondary Identifier:  ? PAC:37249830
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1001 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G054900 0.5kb upstream 0.5kb upstream 7391 true Chr16: 3587242-3594632 Populus trichocarpa
Potri.016G054900 0.5kb upstream 0.5kb upstream 500 false Chr16: 3587242-3587741 Populus trichocarpa
Potri.016G054900 0.5kb downstream 0.5kb downstream 7391 true Chr16: 3587742-3595132 Populus trichocarpa
Potri.016G054900 0.5kb downstream 0.5kb downstream 500 false Chr16: 3594633-3595132 Populus trichocarpa
Potri.016G054900 1.0kb upstream 1.0kb upstream 7891 true Chr16: 3586742-3594632 Populus trichocarpa
Potri.016G054900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3586742-3587741 Populus trichocarpa
Potri.016G054900 1.0kb downstream 1.0kb downstream 7891 true Chr16: 3587742-3595632 Populus trichocarpa
Potri.016G054900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3594633-3595632 Populus trichocarpa
Potri.016G054900 2.0kb upstream 2.0kb upstream 8891 true Chr16: 3585742-3594632 Populus trichocarpa
Potri.016G054900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3585742-3587741 Populus trichocarpa
Potri.016G054900 2.0kb downstream 2.0kb downstream 8891 true Chr16: 3587742-3596632 Populus trichocarpa
Potri.016G054900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3594633-3596632 Populus trichocarpa
Potri.016G054900 5.0kb upstream 5.0kb upstream 11891 true Chr16: 3582742-3594632 Populus trichocarpa
Potri.016G054900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3582742-3587741 Populus trichocarpa
Potri.016G054900 5.0kb downstream 5.0kb downstream 11891 true Chr16: 3587742-3599632 Populus trichocarpa
Potri.016G054900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3594633-3599632 Populus trichocarpa
Potri.016G054900 10.0kb upstream 10.0kb upstream 16891 true Chr16: 3577742-3594632 Populus trichocarpa
Potri.016G054900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3577742-3587741 Populus trichocarpa
Potri.016G054900 10.0kb downstream 10.0kb downstream 16891 true Chr16: 3587742-3604632 Populus trichocarpa
Potri.016G054900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3594633-3604632 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450201 5262 Malpighiales View MSA
124248196 5268 Malvidae View MSA
124073746 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain