Gene : Potri.016G038200 P. trichocarpa v3.1
Defline:  (1 of 1) K01760 - cystathionine beta-lyase (metC) Genomic Order:  391
Name:  ? Potri.016G038200 Secondary Identifier:  ? PAC:37250430
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6936 Populus trichocarpa pathologic  
Ptrichocarpa PWY-702 Populus trichocarpa pathologic  
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G038200 0.5kb upstream 0.5kb upstream 5344 true Chr16: 2348557-2353900 Populus trichocarpa
Potri.016G038200 0.5kb upstream 0.5kb upstream 500 false Chr16: 2353401-2353900 Populus trichocarpa
Potri.016G038200 0.5kb downstream 0.5kb downstream 5344 true Chr16: 2348057-2353400 Populus trichocarpa
Potri.016G038200 0.5kb downstream 0.5kb downstream 500 false Chr16: 2348057-2348556 Populus trichocarpa
Potri.016G038200 1.0kb upstream 1.0kb upstream 5844 true Chr16: 2348557-2354400 Populus trichocarpa
Potri.016G038200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2353401-2354400 Populus trichocarpa
Potri.016G038200 1.0kb downstream 1.0kb downstream 5844 true Chr16: 2347557-2353400 Populus trichocarpa
Potri.016G038200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2347557-2348556 Populus trichocarpa
Potri.016G038200 2.0kb upstream 2.0kb upstream 6844 true Chr16: 2348557-2355400 Populus trichocarpa
Potri.016G038200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2353401-2355400 Populus trichocarpa
Potri.016G038200 2.0kb downstream 2.0kb downstream 6844 true Chr16: 2346557-2353400 Populus trichocarpa
Potri.016G038200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2346557-2348556 Populus trichocarpa
Potri.016G038200 5.0kb upstream 5.0kb upstream 9844 true Chr16: 2348557-2358400 Populus trichocarpa
Potri.016G038200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2353401-2358400 Populus trichocarpa
Potri.016G038200 5.0kb downstream 5.0kb downstream 9844 true Chr16: 2343557-2353400 Populus trichocarpa
Potri.016G038200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2343557-2348556 Populus trichocarpa
Potri.016G038200 10.0kb upstream 10.0kb upstream 14844 true Chr16: 2348557-2363400 Populus trichocarpa
Potri.016G038200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2353401-2363400 Populus trichocarpa
Potri.016G038200 10.0kb downstream 10.0kb downstream 14844 true Chr16: 2338557-2353400 Populus trichocarpa
Potri.016G038200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2338557-2348556 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
122452739 5262 Malpighiales View MSA
124239885 5268 Malvidae View MSA
124062752 5270 Rosid View MSA
123751787 5271 Pentapetalae View MSA
122792966 5272 Eudicot View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain