Gene : Potri.016G041900 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR10774//PTHR10774:SF61//PTHR10774:SF95 - EXTENDED SYNAPTOTAGMIN-RELATED // ELONGATION DEFECTIVE 1 // SUBFAMILY NOT NAMED Genomic Order:  434
Name:  ? Potri.016G041900 Secondary Identifier:  ? PAC:37248972

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G041900 0.5kb upstream 0.5kb upstream 5812 true Chr16: 2597036-2602847 Populus trichocarpa
Potri.016G041900 0.5kb upstream 0.5kb upstream 500 false Chr16: 2597036-2597535 Populus trichocarpa
Potri.016G041900 0.5kb downstream 0.5kb downstream 5812 true Chr16: 2597536-2603347 Populus trichocarpa
Potri.016G041900 0.5kb downstream 0.5kb downstream 500 false Chr16: 2602848-2603347 Populus trichocarpa
Potri.016G041900 1.0kb upstream 1.0kb upstream 6312 true Chr16: 2596536-2602847 Populus trichocarpa
Potri.016G041900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2596536-2597535 Populus trichocarpa
Potri.016G041900 1.0kb downstream 1.0kb downstream 6312 true Chr16: 2597536-2603847 Populus trichocarpa
Potri.016G041900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2602848-2603847 Populus trichocarpa
Potri.016G041900 2.0kb upstream 2.0kb upstream 7312 true Chr16: 2595536-2602847 Populus trichocarpa
Potri.016G041900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2595536-2597535 Populus trichocarpa
Potri.016G041900 2.0kb downstream 2.0kb downstream 7312 true Chr16: 2597536-2604847 Populus trichocarpa
Potri.016G041900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2602848-2604847 Populus trichocarpa
Potri.016G041900 5.0kb upstream 5.0kb upstream 10312 true Chr16: 2592536-2602847 Populus trichocarpa
Potri.016G041900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2592536-2597535 Populus trichocarpa
Potri.016G041900 5.0kb downstream 5.0kb downstream 10312 true Chr16: 2597536-2607847 Populus trichocarpa
Potri.016G041900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2602848-2607847 Populus trichocarpa
Potri.016G041900 10.0kb upstream 10.0kb upstream 15312 true Chr16: 2587536-2602847 Populus trichocarpa
Potri.016G041900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2587536-2597535 Populus trichocarpa
Potri.016G041900 10.0kb downstream 10.0kb downstream 15312 true Chr16: 2597536-2612847 Populus trichocarpa
Potri.016G041900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2602848-2612847 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458170 5262 Malpighiales View MSA
124242251 5268 Malvidae View MSA
124074098 5270 Rosid View MSA
123747804 5271 Pentapetalae View MSA
122791335 5272 Eudicot View MSA
122042334 5273 Angiosperm View MSA
121345597 5274 Embryophyte View MSA
123428781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain