Gene : Potri.016G028200 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR33137:SF2 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15B-RELATED Genomic Order:  285
Name:  ? Potri.016G028200 Secondary Identifier:  ? PAC:37250723
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G028200 0.5kb upstream 0.5kb upstream 7706 true Chr16: 1591793-1599498 Populus trichocarpa
Potri.016G028200 0.5kb upstream 0.5kb upstream 500 false Chr16: 1591793-1592292 Populus trichocarpa
Potri.016G028200 0.5kb downstream 0.5kb downstream 7706 true Chr16: 1592293-1599998 Populus trichocarpa
Potri.016G028200 0.5kb downstream 0.5kb downstream 500 false Chr16: 1599499-1599998 Populus trichocarpa
Potri.016G028200 1.0kb upstream 1.0kb upstream 8206 true Chr16: 1591293-1599498 Populus trichocarpa
Potri.016G028200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1591293-1592292 Populus trichocarpa
Potri.016G028200 1.0kb downstream 1.0kb downstream 8206 true Chr16: 1592293-1600498 Populus trichocarpa
Potri.016G028200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1599499-1600498 Populus trichocarpa
Potri.016G028200 2.0kb upstream 2.0kb upstream 9206 true Chr16: 1590293-1599498 Populus trichocarpa
Potri.016G028200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1590293-1592292 Populus trichocarpa
Potri.016G028200 2.0kb downstream 2.0kb downstream 9206 true Chr16: 1592293-1601498 Populus trichocarpa
Potri.016G028200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1599499-1601498 Populus trichocarpa
Potri.016G028200 5.0kb upstream 5.0kb upstream 12206 true Chr16: 1587293-1599498 Populus trichocarpa
Potri.016G028200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1587293-1592292 Populus trichocarpa
Potri.016G028200 5.0kb downstream 5.0kb downstream 12206 true Chr16: 1592293-1604498 Populus trichocarpa
Potri.016G028200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1599499-1604498 Populus trichocarpa
Potri.016G028200 10.0kb upstream 10.0kb upstream 17206 true Chr16: 1582293-1599498 Populus trichocarpa
Potri.016G028200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1582293-1592292 Populus trichocarpa
Potri.016G028200 10.0kb downstream 10.0kb downstream 17206 true Chr16: 1592293-1609498 Populus trichocarpa
Potri.016G028200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1599499-1609498 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122410865 5262 Malpighiales View MSA
124250144 5268 Malvidae View MSA
124039086 5270 Rosid View MSA
123752539 5271 Pentapetalae View MSA
122797451 5272 Eudicot View MSA
122048270 5273 Angiosperm View MSA
121350628 5274 Embryophyte View MSA
123381823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain