Gene : Potri.016G033300 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR15141:SF40 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED Genomic Order:  338
Name:  ? Potri.016G033300 Secondary Identifier:  ? PAC:37249976
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G033300 0.5kb upstream 0.5kb upstream 4921 true Chr16: 1926970-1931890 Populus trichocarpa
Potri.016G033300 0.5kb upstream 0.5kb upstream 500 false Chr16: 1931391-1931890 Populus trichocarpa
Potri.016G033300 0.5kb downstream 0.5kb downstream 4921 true Chr16: 1926470-1931390 Populus trichocarpa
Potri.016G033300 0.5kb downstream 0.5kb downstream 500 false Chr16: 1926470-1926969 Populus trichocarpa
Potri.016G033300 1.0kb upstream 1.0kb upstream 5421 true Chr16: 1926970-1932390 Populus trichocarpa
Potri.016G033300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1931391-1932390 Populus trichocarpa
Potri.016G033300 1.0kb downstream 1.0kb downstream 5421 true Chr16: 1925970-1931390 Populus trichocarpa
Potri.016G033300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1925970-1926969 Populus trichocarpa
Potri.016G033300 2.0kb upstream 2.0kb upstream 6421 true Chr16: 1926970-1933390 Populus trichocarpa
Potri.016G033300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1931391-1933390 Populus trichocarpa
Potri.016G033300 2.0kb downstream 2.0kb downstream 6421 true Chr16: 1924970-1931390 Populus trichocarpa
Potri.016G033300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1924970-1926969 Populus trichocarpa
Potri.016G033300 5.0kb upstream 5.0kb upstream 9421 true Chr16: 1926970-1936390 Populus trichocarpa
Potri.016G033300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1931391-1936390 Populus trichocarpa
Potri.016G033300 5.0kb downstream 5.0kb downstream 9421 true Chr16: 1921970-1931390 Populus trichocarpa
Potri.016G033300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1921970-1926969 Populus trichocarpa
Potri.016G033300 10.0kb upstream 10.0kb upstream 14421 true Chr16: 1926970-1941390 Populus trichocarpa
Potri.016G033300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1931391-1941390 Populus trichocarpa
Potri.016G033300 10.0kb downstream 10.0kb downstream 14421 true Chr16: 1916970-1931390 Populus trichocarpa
Potri.016G033300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1916970-1926969 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451483 5262 Malpighiales View MSA
124239741 5268 Malvidae View MSA
124062245 5270 Rosid View MSA
123747167 5271 Pentapetalae View MSA
122796041 5272 Eudicot View MSA
122045393 5273 Angiosperm View MSA
121348214 5274 Embryophyte View MSA
123380774 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain