Gene : Potri.016G120900 P. trichocarpa v3.1
Defline:  (1 of 2) K01778 - diaminopimelate epimerase (dapF) Genomic Order:  1234
Name:  ? Potri.016G120900 Secondary Identifier:  ? PAC:37249950
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5097 Populus trichocarpa pathologic  
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G120900 0.5kb upstream 0.5kb upstream 5141 true Chr16: 12569010-12574150 Populus trichocarpa
Potri.016G120900 0.5kb upstream 0.5kb upstream 500 false Chr16: 12569010-12569509 Populus trichocarpa
Potri.016G120900 0.5kb downstream 0.5kb downstream 5141 true Chr16: 12569510-12574650 Populus trichocarpa
Potri.016G120900 0.5kb downstream 0.5kb downstream 500 false Chr16: 12574151-12574650 Populus trichocarpa
Potri.016G120900 1.0kb upstream 1.0kb upstream 5641 true Chr16: 12568510-12574150 Populus trichocarpa
Potri.016G120900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 12568510-12569509 Populus trichocarpa
Potri.016G120900 1.0kb downstream 1.0kb downstream 5641 true Chr16: 12569510-12575150 Populus trichocarpa
Potri.016G120900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 12574151-12575150 Populus trichocarpa
Potri.016G120900 2.0kb upstream 2.0kb upstream 6641 true Chr16: 12567510-12574150 Populus trichocarpa
Potri.016G120900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 12567510-12569509 Populus trichocarpa
Potri.016G120900 2.0kb downstream 2.0kb downstream 6641 true Chr16: 12569510-12576150 Populus trichocarpa
Potri.016G120900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 12574151-12576150 Populus trichocarpa
Potri.016G120900 5.0kb upstream 5.0kb upstream 9641 true Chr16: 12564510-12574150 Populus trichocarpa
Potri.016G120900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 12564510-12569509 Populus trichocarpa
Potri.016G120900 5.0kb downstream 5.0kb downstream 9641 true Chr16: 12569510-12579150 Populus trichocarpa
Potri.016G120900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 12574151-12579150 Populus trichocarpa
Potri.016G120900 10.0kb upstream 10.0kb upstream 14641 true Chr16: 12559510-12574150 Populus trichocarpa
Potri.016G120900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 12559510-12569509 Populus trichocarpa
Potri.016G120900 10.0kb downstream 10.0kb downstream 14641 true Chr16: 12569510-12584150 Populus trichocarpa
Potri.016G120900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 12574151-12584150 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449738 5262 Malpighiales View MSA
124243364 5268 Malvidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain