Gene : Potri.016G128900 P. trichocarpa v3.1
Defline:  (1 of 80) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1315
Name:  ? Potri.016G128900 Secondary Identifier:  ? PAC:37250783
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G128900 0.5kb upstream 0.5kb upstream 4402 true Chr16: 13152175-13156576 Populus trichocarpa
Potri.016G128900 0.5kb upstream 0.5kb upstream 500 false Chr16: 13156077-13156576 Populus trichocarpa
Potri.016G128900 0.5kb downstream 0.5kb downstream 4402 true Chr16: 13151675-13156076 Populus trichocarpa
Potri.016G128900 0.5kb downstream 0.5kb downstream 500 false Chr16: 13151675-13152174 Populus trichocarpa
Potri.016G128900 1.0kb upstream 1.0kb upstream 4902 true Chr16: 13152175-13157076 Populus trichocarpa
Potri.016G128900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 13156077-13157076 Populus trichocarpa
Potri.016G128900 1.0kb downstream 1.0kb downstream 4902 true Chr16: 13151175-13156076 Populus trichocarpa
Potri.016G128900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 13151175-13152174 Populus trichocarpa
Potri.016G128900 2.0kb upstream 2.0kb upstream 5902 true Chr16: 13152175-13158076 Populus trichocarpa
Potri.016G128900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 13156077-13158076 Populus trichocarpa
Potri.016G128900 2.0kb downstream 2.0kb downstream 5902 true Chr16: 13150175-13156076 Populus trichocarpa
Potri.016G128900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 13150175-13152174 Populus trichocarpa
Potri.016G128900 5.0kb upstream 5.0kb upstream 8902 true Chr16: 13152175-13161076 Populus trichocarpa
Potri.016G128900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 13156077-13161076 Populus trichocarpa
Potri.016G128900 5.0kb downstream 5.0kb downstream 8902 true Chr16: 13147175-13156076 Populus trichocarpa
Potri.016G128900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 13147175-13152174 Populus trichocarpa
Potri.016G128900 10.0kb upstream 10.0kb upstream 13902 true Chr16: 13152175-13166076 Populus trichocarpa
Potri.016G128900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 13156077-13166076 Populus trichocarpa
Potri.016G128900 10.0kb downstream 10.0kb downstream 13902 true Chr16: 13142175-13156076 Populus trichocarpa
Potri.016G128900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 13142175-13152174 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426233 5262 Malpighiales View MSA
124243845 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain