Gene : Potri.016G119400 P. trichocarpa v3.1
Defline:  (1 of 2) 2.5.1.62 - Chlorophyll synthase Genomic Order:  1218
Name:  ? Potri.016G119400 Secondary Identifier:  ? PAC:37249859
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5064 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5068 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5086 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G119400 0.5kb upstream 0.5kb upstream 6902 true Chr16: 12427317-12434218 Populus trichocarpa
Potri.016G119400 0.5kb upstream 0.5kb upstream 500 false Chr16: 12427317-12427816 Populus trichocarpa
Potri.016G119400 0.5kb downstream 0.5kb downstream 6902 true Chr16: 12427817-12434718 Populus trichocarpa
Potri.016G119400 0.5kb downstream 0.5kb downstream 500 false Chr16: 12434219-12434718 Populus trichocarpa
Potri.016G119400 1.0kb upstream 1.0kb upstream 7402 true Chr16: 12426817-12434218 Populus trichocarpa
Potri.016G119400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 12426817-12427816 Populus trichocarpa
Potri.016G119400 1.0kb downstream 1.0kb downstream 7402 true Chr16: 12427817-12435218 Populus trichocarpa
Potri.016G119400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 12434219-12435218 Populus trichocarpa
Potri.016G119400 2.0kb upstream 2.0kb upstream 8402 true Chr16: 12425817-12434218 Populus trichocarpa
Potri.016G119400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 12425817-12427816 Populus trichocarpa
Potri.016G119400 2.0kb downstream 2.0kb downstream 8402 true Chr16: 12427817-12436218 Populus trichocarpa
Potri.016G119400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 12434219-12436218 Populus trichocarpa
Potri.016G119400 5.0kb upstream 5.0kb upstream 11402 true Chr16: 12422817-12434218 Populus trichocarpa
Potri.016G119400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 12422817-12427816 Populus trichocarpa
Potri.016G119400 5.0kb downstream 5.0kb downstream 11402 true Chr16: 12427817-12439218 Populus trichocarpa
Potri.016G119400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 12434219-12439218 Populus trichocarpa
Potri.016G119400 10.0kb upstream 10.0kb upstream 16402 true Chr16: 12417817-12434218 Populus trichocarpa
Potri.016G119400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 12417817-12427816 Populus trichocarpa
Potri.016G119400 10.0kb downstream 10.0kb downstream 16402 true Chr16: 12427817-12444218 Populus trichocarpa
Potri.016G119400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 12434219-12444218 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122439042 5262 Malpighiales View MSA
124242139 5268 Malvidae View MSA
124067560 5270 Rosid View MSA
123737432 5271 Pentapetalae View MSA
122786780 5272 Eudicot View MSA
122042815 5273 Angiosperm View MSA
121346314 5274 Embryophyte View MSA
123424294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain