Gene : Potri.016G112400 P. trichocarpa v3.1
Defline:  (1 of 2) 2.3.1.133//2.3.1.99 - Shikimate O-hydroxycinnamoyltransferase // Quinate O-hydroxycinnamoyltransferase / Hydroxycinnamoyl coenzyme A-quinate transferase Genomic Order:  1146
Name:  ? Potri.016G112400 Secondary Identifier:  ? PAC:37250634
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-361 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6040 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G112400 0.5kb upstream 0.5kb upstream 5479 true Chr16: 11558064-11563542 Populus trichocarpa
Potri.016G112400 0.5kb upstream 0.5kb upstream 500 false Chr16: 11558064-11558563 Populus trichocarpa
Potri.016G112400 0.5kb downstream 0.5kb downstream 5479 true Chr16: 11558564-11564042 Populus trichocarpa
Potri.016G112400 0.5kb downstream 0.5kb downstream 500 false Chr16: 11563543-11564042 Populus trichocarpa
Potri.016G112400 1.0kb upstream 1.0kb upstream 5979 true Chr16: 11557564-11563542 Populus trichocarpa
Potri.016G112400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 11557564-11558563 Populus trichocarpa
Potri.016G112400 1.0kb downstream 1.0kb downstream 5979 true Chr16: 11558564-11564542 Populus trichocarpa
Potri.016G112400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 11563543-11564542 Populus trichocarpa
Potri.016G112400 2.0kb upstream 2.0kb upstream 6979 true Chr16: 11556564-11563542 Populus trichocarpa
Potri.016G112400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 11556564-11558563 Populus trichocarpa
Potri.016G112400 2.0kb downstream 2.0kb downstream 6979 true Chr16: 11558564-11565542 Populus trichocarpa
Potri.016G112400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 11563543-11565542 Populus trichocarpa
Potri.016G112400 5.0kb upstream 5.0kb upstream 9979 true Chr16: 11553564-11563542 Populus trichocarpa
Potri.016G112400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 11553564-11558563 Populus trichocarpa
Potri.016G112400 5.0kb downstream 5.0kb downstream 9979 true Chr16: 11558564-11568542 Populus trichocarpa
Potri.016G112400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 11563543-11568542 Populus trichocarpa
Potri.016G112400 10.0kb upstream 10.0kb upstream 14979 true Chr16: 11548564-11563542 Populus trichocarpa
Potri.016G112400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 11548564-11558563 Populus trichocarpa
Potri.016G112400 10.0kb downstream 10.0kb downstream 14979 true Chr16: 11558564-11573542 Populus trichocarpa
Potri.016G112400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 11563543-11573542 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426596 5262 Malpighiales View MSA
124241469 5268 Malvidae View MSA
124064674 5270 Rosid View MSA
123740627 5271 Pentapetalae View MSA
122795284 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain