Gene : Potri.016G096400 P. trichocarpa v3.1
Defline:  (1 of 79) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  988
Name:  ? Potri.016G096400 Secondary Identifier:  ? PAC:37249724
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G096400 0.5kb upstream 0.5kb upstream 3135 true Chr16: 9244326-9247460 Populus trichocarpa
Potri.016G096400 0.5kb upstream 0.5kb upstream 500 false Chr16: 9246961-9247460 Populus trichocarpa
Potri.016G096400 0.5kb downstream 0.5kb downstream 3135 true Chr16: 9243826-9246960 Populus trichocarpa
Potri.016G096400 0.5kb downstream 0.5kb downstream 500 false Chr16: 9243826-9244325 Populus trichocarpa
Potri.016G096400 1.0kb upstream 1.0kb upstream 3635 true Chr16: 9244326-9247960 Populus trichocarpa
Potri.016G096400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9246961-9247960 Populus trichocarpa
Potri.016G096400 1.0kb downstream 1.0kb downstream 3635 true Chr16: 9243326-9246960 Populus trichocarpa
Potri.016G096400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9243326-9244325 Populus trichocarpa
Potri.016G096400 2.0kb upstream 2.0kb upstream 4635 true Chr16: 9244326-9248960 Populus trichocarpa
Potri.016G096400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9246961-9248960 Populus trichocarpa
Potri.016G096400 2.0kb downstream 2.0kb downstream 4635 true Chr16: 9242326-9246960 Populus trichocarpa
Potri.016G096400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9242326-9244325 Populus trichocarpa
Potri.016G096400 5.0kb upstream 5.0kb upstream 7635 true Chr16: 9244326-9251960 Populus trichocarpa
Potri.016G096400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9246961-9251960 Populus trichocarpa
Potri.016G096400 5.0kb downstream 5.0kb downstream 7635 true Chr16: 9239326-9246960 Populus trichocarpa
Potri.016G096400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9239326-9244325 Populus trichocarpa
Potri.016G096400 10.0kb upstream 10.0kb upstream 12635 true Chr16: 9244326-9256960 Populus trichocarpa
Potri.016G096400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9246961-9256960 Populus trichocarpa
Potri.016G096400 10.0kb downstream 10.0kb downstream 12635 true Chr16: 9234326-9246960 Populus trichocarpa
Potri.016G096400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9234326-9244325 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026515 5273 Angiosperm View MSA
122455033 5262 Malpighiales View MSA
124240821 5268 Malvidae View MSA
124069148 5270 Rosid View MSA
123736383 5271 Pentapetalae View MSA
122786219 5272 Eudicot View MSA
121296364 5274 Embryophyte View MSA
123334542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain