Gene : Potri.016G091800 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  943
Name:  ? Potri.016G091800 Secondary Identifier:  ? PAC:37250110

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ANAEROFRUCAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAGLYCOLYSIS-PWY Populus trichocarpa pathologic  
Ptrichocarpa CALVIN-PWY Populus trichocarpa pathologic  
Ptrichocarpa GLUCONEO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-399 Populus trichocarpa pathologic  
Ptrichocarpa SUCSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G091800 0.5kb upstream 0.5kb upstream 8057 true Chr16: 7569407-7577463 Populus trichocarpa
Potri.016G091800 0.5kb upstream 0.5kb upstream 500 false Chr16: 7576964-7577463 Populus trichocarpa
Potri.016G091800 0.5kb downstream 0.5kb downstream 8057 true Chr16: 7568907-7576963 Populus trichocarpa
Potri.016G091800 0.5kb downstream 0.5kb downstream 500 false Chr16: 7568907-7569406 Populus trichocarpa
Potri.016G091800 1.0kb upstream 1.0kb upstream 8557 true Chr16: 7569407-7577963 Populus trichocarpa
Potri.016G091800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7576964-7577963 Populus trichocarpa
Potri.016G091800 1.0kb downstream 1.0kb downstream 8557 true Chr16: 7568407-7576963 Populus trichocarpa
Potri.016G091800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7568407-7569406 Populus trichocarpa
Potri.016G091800 2.0kb upstream 2.0kb upstream 9557 true Chr16: 7569407-7578963 Populus trichocarpa
Potri.016G091800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7576964-7578963 Populus trichocarpa
Potri.016G091800 2.0kb downstream 2.0kb downstream 9557 true Chr16: 7567407-7576963 Populus trichocarpa
Potri.016G091800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7567407-7569406 Populus trichocarpa
Potri.016G091800 5.0kb upstream 5.0kb upstream 12557 true Chr16: 7569407-7581963 Populus trichocarpa
Potri.016G091800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7576964-7581963 Populus trichocarpa
Potri.016G091800 5.0kb downstream 5.0kb downstream 12557 true Chr16: 7564407-7576963 Populus trichocarpa
Potri.016G091800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7564407-7569406 Populus trichocarpa
Potri.016G091800 10.0kb upstream 10.0kb upstream 17557 true Chr16: 7569407-7586963 Populus trichocarpa
Potri.016G091800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7576964-7586963 Populus trichocarpa
Potri.016G091800 10.0kb downstream 10.0kb downstream 17557 true Chr16: 7559407-7576963 Populus trichocarpa
Potri.016G091800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7559407-7569406 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122463617 5262 Malpighiales View MSA
124246185 5268 Malvidae View MSA
124069828 5270 Rosid View MSA
123742375 5271 Pentapetalae View MSA
122794772 5272 Eudicot View MSA
122048515 5273 Angiosperm View MSA
121310998 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain