Gene : Potri.018G048100 P. trichocarpa v3.1

Defline:  similar to MTD1. [ORG:Medicago truncatula]; [ co-ortholog (2of2) of AAF86687, At5g21940, At3g43850, ] Genomic Order:  488
Name:  ? Potri.018G048100 Secondary Identifier:  ? PAC:37247825

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G048100 0.5kb upstream 0.5kb upstream 2506 true Chr18: 4566665-4569170 Populus trichocarpa
Potri.018G048100 0.5kb upstream 0.5kb upstream 500 false Chr18: 4568671-4569170 Populus trichocarpa
Potri.018G048100 0.5kb downstream 0.5kb downstream 2506 true Chr18: 4566165-4568670 Populus trichocarpa
Potri.018G048100 0.5kb downstream 0.5kb downstream 500 false Chr18: 4566165-4566664 Populus trichocarpa
Potri.018G048100 1.0kb upstream 1.0kb upstream 3006 true Chr18: 4566665-4569670 Populus trichocarpa
Potri.018G048100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4568671-4569670 Populus trichocarpa
Potri.018G048100 1.0kb downstream 1.0kb downstream 3006 true Chr18: 4565665-4568670 Populus trichocarpa
Potri.018G048100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4565665-4566664 Populus trichocarpa
Potri.018G048100 2.0kb upstream 2.0kb upstream 4006 true Chr18: 4566665-4570670 Populus trichocarpa
Potri.018G048100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4568671-4570670 Populus trichocarpa
Potri.018G048100 2.0kb downstream 2.0kb downstream 4006 true Chr18: 4564665-4568670 Populus trichocarpa
Potri.018G048100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4564665-4566664 Populus trichocarpa
Potri.018G048100 5.0kb upstream 5.0kb upstream 7006 true Chr18: 4566665-4573670 Populus trichocarpa
Potri.018G048100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4568671-4573670 Populus trichocarpa
Potri.018G048100 5.0kb downstream 5.0kb downstream 7006 true Chr18: 4561665-4568670 Populus trichocarpa
Potri.018G048100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4561665-4566664 Populus trichocarpa
Potri.018G048100 10.0kb upstream 10.0kb upstream 12006 true Chr18: 4566665-4578670 Populus trichocarpa
Potri.018G048100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4568671-4578670 Populus trichocarpa
Potri.018G048100 10.0kb downstream 10.0kb downstream 12006 true Chr18: 4556665-4568670 Populus trichocarpa
Potri.018G048100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4556665-4566664 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449408 5262 Malpighiales View MSA
124250850 5268 Malvidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain