Gene : Potri.018G028700 P. trichocarpa v3.1
Defline:  (1 of 80) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  293
Name:  ? Potri.018G028700 Secondary Identifier:  ? PAC:37246694
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G028700 0.5kb upstream 0.5kb upstream 2741 true Chr18: 2265547-2268287 Populus trichocarpa
Potri.018G028700 0.5kb upstream 0.5kb upstream 500 false Chr18: 2265547-2266046 Populus trichocarpa
Potri.018G028700 0.5kb downstream 0.5kb downstream 2741 true Chr18: 2266047-2268787 Populus trichocarpa
Potri.018G028700 0.5kb downstream 0.5kb downstream 500 false Chr18: 2268288-2268787 Populus trichocarpa
Potri.018G028700 1.0kb upstream 1.0kb upstream 3241 true Chr18: 2265047-2268287 Populus trichocarpa
Potri.018G028700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2265047-2266046 Populus trichocarpa
Potri.018G028700 1.0kb downstream 1.0kb downstream 3241 true Chr18: 2266047-2269287 Populus trichocarpa
Potri.018G028700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2268288-2269287 Populus trichocarpa
Potri.018G028700 2.0kb upstream 2.0kb upstream 4241 true Chr18: 2264047-2268287 Populus trichocarpa
Potri.018G028700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2264047-2266046 Populus trichocarpa
Potri.018G028700 2.0kb downstream 2.0kb downstream 4241 true Chr18: 2266047-2270287 Populus trichocarpa
Potri.018G028700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2268288-2270287 Populus trichocarpa
Potri.018G028700 5.0kb upstream 5.0kb upstream 7241 true Chr18: 2261047-2268287 Populus trichocarpa
Potri.018G028700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2261047-2266046 Populus trichocarpa
Potri.018G028700 5.0kb downstream 5.0kb downstream 7241 true Chr18: 2266047-2273287 Populus trichocarpa
Potri.018G028700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2268288-2273287 Populus trichocarpa
Potri.018G028700 10.0kb upstream 10.0kb upstream 12241 true Chr18: 2256047-2268287 Populus trichocarpa
Potri.018G028700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2256047-2266046 Populus trichocarpa
Potri.018G028700 10.0kb downstream 10.0kb downstream 12241 true Chr18: 2266047-2278287 Populus trichocarpa
Potri.018G028700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2268288-2278287 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460549 5262 Malpighiales View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain