Gene : Potri.018G030700 P. trichocarpa v3.1

Defline:  (1 of 4) K07936 - GTP-binding nuclear protein Ran (RAN) Genomic Order:  313
Name:  ? Potri.018G030700 Secondary Identifier:  ? PAC:37246899

Sequence Feature Displayer

Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ILEUDEG-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5136 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5138 Populus trichocarpa pathologic  
Ptrichocarpa PWY-561 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6435 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7036 Populus trichocarpa pathologic  
Ptrichocarpa PWY-735 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7606 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7726 Populus trichocarpa pathologic  
Ptrichocarpa VALDEG-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G030700 0.5kb upstream 0.5kb upstream 3437 true Chr18: 2404280-2407716 Populus trichocarpa
Potri.018G030700 0.5kb upstream 0.5kb upstream 500 false Chr18: 2407217-2407716 Populus trichocarpa
Potri.018G030700 0.5kb downstream 0.5kb downstream 3437 true Chr18: 2403780-2407216 Populus trichocarpa
Potri.018G030700 0.5kb downstream 0.5kb downstream 500 false Chr18: 2403780-2404279 Populus trichocarpa
Potri.018G030700 1.0kb upstream 1.0kb upstream 3937 true Chr18: 2404280-2408216 Populus trichocarpa
Potri.018G030700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2407217-2408216 Populus trichocarpa
Potri.018G030700 1.0kb downstream 1.0kb downstream 3937 true Chr18: 2403280-2407216 Populus trichocarpa
Potri.018G030700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2403280-2404279 Populus trichocarpa
Potri.018G030700 2.0kb upstream 2.0kb upstream 4937 true Chr18: 2404280-2409216 Populus trichocarpa
Potri.018G030700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2407217-2409216 Populus trichocarpa
Potri.018G030700 2.0kb downstream 2.0kb downstream 4937 true Chr18: 2402280-2407216 Populus trichocarpa
Potri.018G030700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2402280-2404279 Populus trichocarpa
Potri.018G030700 5.0kb upstream 5.0kb upstream 7937 true Chr18: 2404280-2412216 Populus trichocarpa
Potri.018G030700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2407217-2412216 Populus trichocarpa
Potri.018G030700 5.0kb downstream 5.0kb downstream 7937 true Chr18: 2399280-2407216 Populus trichocarpa
Potri.018G030700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2399280-2404279 Populus trichocarpa
Potri.018G030700 10.0kb upstream 10.0kb upstream 12937 true Chr18: 2404280-2417216 Populus trichocarpa
Potri.018G030700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2407217-2417216 Populus trichocarpa
Potri.018G030700 10.0kb downstream 10.0kb downstream 12937 true Chr18: 2394280-2407216 Populus trichocarpa
Potri.018G030700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2394280-2404279 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122412078 5262 Malpighiales View MSA
124206425 5268 Malvidae View MSA
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain