Gene : Potri.018G019300 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR21145:SF1 - CHORISMATE MUTASE 2 Genomic Order:  199
Name:  ? Potri.018G019300 Secondary Identifier:  ? PAC:37247136
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3461 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3462 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3481 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G019300 0.5kb upstream 0.5kb upstream 3836 true Chr18: 1463591-1467426 Populus trichocarpa
Potri.018G019300 0.5kb upstream 0.5kb upstream 500 false Chr18: 1466927-1467426 Populus trichocarpa
Potri.018G019300 0.5kb downstream 0.5kb downstream 3836 true Chr18: 1463091-1466926 Populus trichocarpa
Potri.018G019300 0.5kb downstream 0.5kb downstream 500 false Chr18: 1463091-1463590 Populus trichocarpa
Potri.018G019300 1.0kb upstream 1.0kb upstream 4336 true Chr18: 1463591-1467926 Populus trichocarpa
Potri.018G019300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1466927-1467926 Populus trichocarpa
Potri.018G019300 1.0kb downstream 1.0kb downstream 4336 true Chr18: 1462591-1466926 Populus trichocarpa
Potri.018G019300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1462591-1463590 Populus trichocarpa
Potri.018G019300 2.0kb upstream 2.0kb upstream 5336 true Chr18: 1463591-1468926 Populus trichocarpa
Potri.018G019300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1466927-1468926 Populus trichocarpa
Potri.018G019300 2.0kb downstream 2.0kb downstream 5336 true Chr18: 1461591-1466926 Populus trichocarpa
Potri.018G019300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1461591-1463590 Populus trichocarpa
Potri.018G019300 5.0kb upstream 5.0kb upstream 8336 true Chr18: 1463591-1471926 Populus trichocarpa
Potri.018G019300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1466927-1471926 Populus trichocarpa
Potri.018G019300 5.0kb downstream 5.0kb downstream 8336 true Chr18: 1458591-1466926 Populus trichocarpa
Potri.018G019300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1458591-1463590 Populus trichocarpa
Potri.018G019300 10.0kb upstream 10.0kb upstream 13336 true Chr18: 1463591-1476926 Populus trichocarpa
Potri.018G019300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1466927-1476926 Populus trichocarpa
Potri.018G019300 10.0kb downstream 10.0kb downstream 13336 true Chr18: 1453591-1466926 Populus trichocarpa
Potri.018G019300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1453591-1463590 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451742 5262 Malpighiales View MSA
124239132 5268 Malvidae View MSA
124062994 5270 Rosid View MSA
123742772 5271 Pentapetalae View MSA
122797161 5272 Eudicot View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain