Gene : Potri.018G112900 P. trichocarpa v3.1

Defline:  (1 of 3) PF02602 - Uroporphyrinogen-III synthase HemD (HEM4) Genomic Order:  1151
Name:  ? Potri.018G112900 Secondary Identifier:  ? PAC:37247089

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G112900 0.5kb upstream 0.5kb upstream 1837 true Chr18: 13843774-13845610 Populus trichocarpa
Potri.018G112900 0.5kb upstream 0.5kb upstream 500 false Chr18: 13843774-13844273 Populus trichocarpa
Potri.018G112900 0.5kb downstream 0.5kb downstream 1837 true Chr18: 13844274-13846110 Populus trichocarpa
Potri.018G112900 0.5kb downstream 0.5kb downstream 500 false Chr18: 13845611-13846110 Populus trichocarpa
Potri.018G112900 1.0kb upstream 1.0kb upstream 2337 true Chr18: 13843274-13845610 Populus trichocarpa
Potri.018G112900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 13843274-13844273 Populus trichocarpa
Potri.018G112900 1.0kb downstream 1.0kb downstream 2337 true Chr18: 13844274-13846610 Populus trichocarpa
Potri.018G112900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 13845611-13846610 Populus trichocarpa
Potri.018G112900 2.0kb upstream 2.0kb upstream 3337 true Chr18: 13842274-13845610 Populus trichocarpa
Potri.018G112900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 13842274-13844273 Populus trichocarpa
Potri.018G112900 2.0kb downstream 2.0kb downstream 3337 true Chr18: 13844274-13847610 Populus trichocarpa
Potri.018G112900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 13845611-13847610 Populus trichocarpa
Potri.018G112900 5.0kb upstream 5.0kb upstream 6337 true Chr18: 13839274-13845610 Populus trichocarpa
Potri.018G112900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 13839274-13844273 Populus trichocarpa
Potri.018G112900 5.0kb downstream 5.0kb downstream 6337 true Chr18: 13844274-13850610 Populus trichocarpa
Potri.018G112900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 13845611-13850610 Populus trichocarpa
Potri.018G112900 10.0kb upstream 10.0kb upstream 11337 true Chr18: 13834274-13845610 Populus trichocarpa
Potri.018G112900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 13834274-13844273 Populus trichocarpa
Potri.018G112900 10.0kb downstream 10.0kb downstream 11337 true Chr18: 13844274-13855610 Populus trichocarpa
Potri.018G112900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 13845611-13855610 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461500 5262 Malpighiales View MSA
124248401 5268 Malvidae View MSA
124071567 5270 Rosid View MSA
123744123 5271 Pentapetalae View MSA
122794339 5272 Eudicot View MSA
122048560 5273 Angiosperm View MSA
121348173 5274 Embryophyte View MSA
123426195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain