Gene : Potri.T054400 P. trichocarpa v3.1
Defline:  (1 of 3) K12827 - splicing factor 3A subunit 3 (SF3A3, SAP61, PRP9) Genomic Order:  13
Name:  ? Potri.T054400 Secondary Identifier:  ? PAC:37251061
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T054400 0.5kb upstream 0.5kb upstream 6407 true scaffold_49: 199445-205851 Populus trichocarpa
Potri.T054400 0.5kb upstream 0.5kb upstream 500 false scaffold_49: 199445-199944 Populus trichocarpa
Potri.T054400 0.5kb downstream 0.5kb downstream 6407 true scaffold_49: 199945-206351 Populus trichocarpa
Potri.T054400 0.5kb downstream 0.5kb downstream 500 false scaffold_49: 205852-206351 Populus trichocarpa
Potri.T054400 1.0kb upstream 1.0kb upstream 6907 true scaffold_49: 198945-205851 Populus trichocarpa
Potri.T054400 1.0kb upstream 1.0kb upstream 1000 false scaffold_49: 198945-199944 Populus trichocarpa
Potri.T054400 1.0kb downstream 1.0kb downstream 6907 true scaffold_49: 199945-206851 Populus trichocarpa
Potri.T054400 1.0kb downstream 1.0kb downstream 1000 false scaffold_49: 205852-206851 Populus trichocarpa
Potri.T054400 2.0kb upstream 2.0kb upstream 7907 true scaffold_49: 197945-205851 Populus trichocarpa
Potri.T054400 2.0kb upstream 2.0kb upstream 2000 false scaffold_49: 197945-199944 Populus trichocarpa
Potri.T054400 2.0kb downstream 2.0kb downstream 7907 true scaffold_49: 199945-207851 Populus trichocarpa
Potri.T054400 2.0kb downstream 2.0kb downstream 2000 false scaffold_49: 205852-207851 Populus trichocarpa
Potri.T054400 5.0kb upstream 5.0kb upstream 10907 true scaffold_49: 194945-205851 Populus trichocarpa
Potri.T054400 5.0kb upstream 5.0kb upstream 5000 false scaffold_49: 194945-199944 Populus trichocarpa
Potri.T054400 5.0kb downstream 5.0kb downstream 10907 true scaffold_49: 199945-210851 Populus trichocarpa
Potri.T054400 5.0kb downstream 5.0kb downstream 5000 false scaffold_49: 205852-210851 Populus trichocarpa
Potri.T054400 10.0kb upstream 10.0kb upstream 15907 true scaffold_49: 189945-205851 Populus trichocarpa
Potri.T054400 10.0kb upstream 10.0kb upstream 10000 false scaffold_49: 189945-199944 Populus trichocarpa
Potri.T054400 10.0kb downstream 10.0kb downstream 15907 true scaffold_49: 199945-215851 Populus trichocarpa
Potri.T054400 10.0kb downstream 10.0kb downstream 10000 false scaffold_49: 205852-215851 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448979 5262 Malpighiales View MSA
124237031 5268 Malvidae View MSA
124061347 5270 Rosid View MSA
123747659 5271 Pentapetalae View MSA
122793662 5272 Eudicot View MSA
122042756 5273 Angiosperm View MSA
123429134 5275 Viridiplantae View MSA
121345552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain