Gene : Potri.018G101500 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR11570:SF0 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Genomic Order:  1037
Name:  ? Potri.018G101500 Secondary Identifier:  ? PAC:37247623

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ARGSPECAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa BSUBPOLYAMSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa POLYAMINSYN3-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-7528 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G101500 0.5kb upstream 0.5kb upstream 1691 true Chr18: 12907535-12909225 Populus trichocarpa
Potri.018G101500 0.5kb upstream 0.5kb upstream 500 false Chr18: 12907535-12908034 Populus trichocarpa
Potri.018G101500 0.5kb downstream 0.5kb downstream 1691 true Chr18: 12908035-12909725 Populus trichocarpa
Potri.018G101500 0.5kb downstream 0.5kb downstream 500 false Chr18: 12909226-12909725 Populus trichocarpa
Potri.018G101500 1.0kb upstream 1.0kb upstream 2191 true Chr18: 12907035-12909225 Populus trichocarpa
Potri.018G101500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 12907035-12908034 Populus trichocarpa
Potri.018G101500 1.0kb downstream 1.0kb downstream 2191 true Chr18: 12908035-12910225 Populus trichocarpa
Potri.018G101500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 12909226-12910225 Populus trichocarpa
Potri.018G101500 2.0kb upstream 2.0kb upstream 3191 true Chr18: 12906035-12909225 Populus trichocarpa
Potri.018G101500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 12906035-12908034 Populus trichocarpa
Potri.018G101500 2.0kb downstream 2.0kb downstream 3191 true Chr18: 12908035-12911225 Populus trichocarpa
Potri.018G101500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 12909226-12911225 Populus trichocarpa
Potri.018G101500 5.0kb upstream 5.0kb upstream 6191 true Chr18: 12903035-12909225 Populus trichocarpa
Potri.018G101500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 12903035-12908034 Populus trichocarpa
Potri.018G101500 5.0kb downstream 5.0kb downstream 6191 true Chr18: 12908035-12914225 Populus trichocarpa
Potri.018G101500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 12909226-12914225 Populus trichocarpa
Potri.018G101500 10.0kb upstream 10.0kb upstream 11191 true Chr18: 12898035-12909225 Populus trichocarpa
Potri.018G101500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 12898035-12908034 Populus trichocarpa
Potri.018G101500 10.0kb downstream 10.0kb downstream 11191 true Chr18: 12908035-12919225 Populus trichocarpa
Potri.018G101500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 12909226-12919225 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451028 5262 Malpighiales View MSA
124246776 5268 Malvidae View MSA
124070992 5270 Rosid View MSA
123742388 5271 Pentapetalae View MSA
122794045 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain